Gene Psyr_3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3255 
Symbol 
ID3368782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3900749 
End bp3901237 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content61% 
IMG OID637653606 
Productputative monovalent cation/H+ antiporter subunit E 
Protein accessionYP_236325 
Protein GI66046484 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.314068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC TGTTTCCCGC CCCGCTGCTC TCGTTGGCAC TCTGGCTGTT GTGGTTGGTA 
TTGAATCTGT CGATCAGCCC CGGTCACCTG CTGCTGGGCG CGGTGCTGGG GTTTCTCGCC
CCAATATTGA TGGCCCCCTT GCGCCCGCTG CCGGTACGTA TTCGCAAACC CGGCACGATC
CTGAAGTTTC TATGGCGGGT GGGACGCGAC GTGGTGGTCT CCAACGTGCA GGTCGGCCTG
AGCGTCTGGC GGCTCGAAAG CCGTCCGCCA CGCTCGGCTT TCGTGCGCAT TCCACTGGAT
CTGCACGACG CCCACGGCCT CGCCGCGCTG GCGATGGTCA CCACGGTAGT GCCGGGAACG
GTGTGGTCGG AGCTGGCACT GGATCGCAGC GTGCTGCTGA TGCATGTCTT CGATCTGGAG
GACGAAGCAC AATTCATCGA GCACTTCAAA ACCACCTATG AGCGACCGTT GATGGAGATC
TTTCAATGA
 
Protein sequence
MKRLFPAPLL SLALWLLWLV LNLSISPGHL LLGAVLGFLA PILMAPLRPL PVRIRKPGTI 
LKFLWRVGRD VVVSNVQVGL SVWRLESRPP RSAFVRIPLD LHDAHGLAAL AMVTTVVPGT
VWSELALDRS VLLMHVFDLE DEAQFIEHFK TTYERPLMEI FQ