Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3246 |
Symbol | |
ID | 3368773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3888755 |
End bp | 3889660 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637653597 |
Product | Ku |
Protein accession | YP_236316 |
Protein GI | 66046475 |
COG category | [S] Function unknown |
COG ID | [COG1273] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.208031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGGG CAATCTGGAA GGGCGCAATC AGCTTCGGGC TGGTGCATAT ACCGGTCGCG TTGGTTTCGG CGACAACGTC GACCAGTGTC GACTTCGACT GGCTCGACAA ACGCAGCATG GACCCGGTCG GCTACAAGCG AATCAACAAG GTCACCGGCA AGGAAGTCAC CAGCGAAAAC ATCGTCAAGG GCGTGGCATA CGAGAAGGAT CGCTATGTGG TACTCAGCGA GGAGGAAATT CGTTCCGCGC ACCCCAAATC GACGCAGACC ATCGACATAT TCGCCTTCGT CGACAGCCAG CAGATCCCTT TGCAGAACAT CGACACGCCT TATTTCCTGA CGCCCGACAA GCGCGGCGAG AAAGTCTATG CGTTATTGCG CGAAACCCTG GTCGATACTA AAAAGGTCGC GCTGGCTAAC GTCGTGCTGC ATACCCGCGA ACACCTGGCG GCGGTCATGC CGCTGGAGTC GGCGCTGGTG ATGGTGATCC TGCGCTGGCC TGCCGACGTG CGTGAACTGG ACACACTGGA ACTGAGCGAC GCGGTGACCG ACGCCAAGTT GAACAAGAGC GAACGTGACA TGGCCAAGCG TCTGGTCAAG GACATGAGCG CTGACTGGCA GCCTGAGCAG TATCGCGACA CCTTTCAGGA CAAGATCATG CACCTGGTCA AGACCAAGGC AGACGAAGGC GAGATCGAGG ATGTCGAGAC CGATCCGGCC GAGGAAGAAC GCAAGAGTGC CGATGTCATC GACCTCACCG ACCTGCTGCG ACGCAGTCTG GCGGGCAAGG GCGGGGCCGG TAAAGCCAAG ACGAGCAAGC CTGCGGCGAA GGAAAAACCG GCCGACAAGG ACGGTGCCAG GCCCAAGCGG CCCGCCGCAC GTAAGAAAAC CAGCAAAGCC TCTTGA
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Protein sequence | MARAIWKGAI SFGLVHIPVA LVSATTSTSV DFDWLDKRSM DPVGYKRINK VTGKEVTSEN IVKGVAYEKD RYVVLSEEEI RSAHPKSTQT IDIFAFVDSQ QIPLQNIDTP YFLTPDKRGE KVYALLRETL VDTKKVALAN VVLHTREHLA AVMPLESALV MVILRWPADV RELDTLELSD AVTDAKLNKS ERDMAKRLVK DMSADWQPEQ YRDTFQDKIM HLVKTKADEG EIEDVETDPA EEERKSADVI DLTDLLRRSL AGKGGAGKAK TSKPAAKEKP ADKDGARPKR PAARKKTSKA S
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