| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3207 |
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| Symbol | |
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| ID | 3368729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3837755 |
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| End bp | 3839608 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637653553 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_236277 |
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| Protein GI | 66046436 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000541221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.239545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTC TCTTTCTGAC TTTCGTATTC CCCCTCATCG GCTTTCTGCT GCTGTCGTTC
TCCCGTGGAC GCATCTCGGA AAACCTCGCT GCGCTGATCG GCGTCGGCTC CATCGGCCTG
TCAGCCATTG TCACTGCCTG GGTCATCTGG CAGTTCAACG TAGCACCCCC CGAAGGCGGT
CACTACAGCC AGGTGCTGTG GCGCTGGATG GACGTCGATG GCTTCCAGCC CAACTTCGCA
CTGTATCTGG ACGGGCTGTC CGTCACGATG CTGGGCGTCG TGGTTGGCGT CGGCTTCCTG
ATCCACCTGT TCGCGTCCTG GTACATGCGC GGTGAAGCGG GCTATTCGCG CTTCTTCTCC
TACACCAACC TGTTCATTGC CAGCATGCTG TTCCTGATCC TGGGCGACAA CCTGCTGTTC
ATCTACTTCG GTTGGGAAGG CGTAGGGCTG TGCAGCTACC TGTTGATCGG TTTCTATTAC
AGCAACCGCA ACAACGGCAA CGCAGCGCTC AAAGCGTTCA TCGTCACCCG TATCGGTGAC
GTATTCATGG CTATCGGTCT GTTCATCCTG TTCCAGCAAC TGGGCACGCT CAATGTGCAG
GAACTGCTGG TCAGGGCGCC GGAACACTTC AAGGTCGGCG ATTTCTGGAT CGTGCTGGCG
ACGTTGATGC TGCTGGGCGG TGCGGTCGGT AAATCCGCCC AGCTGCCACT GCAAACCTGG
CTGGCTGACG CGATGGCCGG TCCTACTCCG GTTTCGGCGC TGATCCACGC AGCGACCATG
GTCACGGCGG GCGTTTACCT GATCGCGCGT ACTCACGGCC TGTTTGCACT GGCACCCGAC
ATTCTGCATC TGGTCGGGAT TGTCGGCGGC GTCACGCTGG TTCTGGCGGG TTTCGCCGCA
TTGGTGCAGA CCGACATCAA GCGTATCCTC GCCTACTCGA CCATGAGCCA GATCGGCTAC
ATGTTCCTGG CACTGGGCGT CGGCGCCTGG GAAGGCGCGA TCTTCCACCT GATGACCCAC
GCCTTCTTCA AGGCGCTGCT GTTCCTTGCT TCCGGTGCGG TGATCGTTGC CTGCCACCAC
GAGCAGAACA TCTTCAAGAT GGGCGGTCTG TGGAAGAAAC TGCCATTGGC CTACGCCAGC
TTCATCGTCG GTGGCGCTGC TCTTTCCGCT CTGCCGCTGC TGACGGCGGG CTTCTACTCC
AAGGACGAAA TTCTCTGGGA AGCATTTGCC AGCGGTAACA ACGGTTTGCT GTATGCCGGC
CTGGTGGGCG CGTTCATGAC GTCGCTGTAC ACCTTCCGCC TGATCTTCAT CGCGTTCCAC
GGAGAAGCCA AGACCGAAGC ACACGCAGGT CACGGCATCG CTCACTGGCT GCCACTGTCG
GTGCTGATCG TGCTGTCGAC GTTCATCGGC GCGCTGATCA CTCCGCCGCT GGCCGGTGTG
CTGCCGCAGA GCGTCGGCCA TGCCGGTGGC GAAGCCAAGC ACAGTCTGGA GATCGCCTCC
GGCGCCATCG CGCTGGCCGG TATCCTGCTG GCAGCGTTGC TGTTCCTCGG CAAGCGCCGC
CTGGCAACGG CTATCGCCAA CAGCGCTCCG GGCCGTTTCC TCTCGGCCTG GTGGTTCGCG
GCATGGGGCT TCGACTGGAT CTACGACAAG CTGTTCGTCA AGCCGTATCT GGCAATCAGC
CATGTACTGC GTAGTGATCC GTTCGACCGC ACCATCGGCT TGATCCCACG TCTGGTCAAA
GGCGGTCATG ACACCATGAG CCGCACCGAG ACCGGCCAGT TGCGTTGGTA TGCTGCCTCG
ATCGCCGTGG GTGCCGTTCT GGTACTCGGT GCCGTCGTTC TGGTTGCGAT CTGA
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| Protein sequence | MNLLFLTFVF PLIGFLLLSF SRGRISENLA ALIGVGSIGL SAIVTAWVIW QFNVAPPEGG
HYSQVLWRWM DVDGFQPNFA LYLDGLSVTM LGVVVGVGFL IHLFASWYMR GEAGYSRFFS
YTNLFIASML FLILGDNLLF IYFGWEGVGL CSYLLIGFYY SNRNNGNAAL KAFIVTRIGD
VFMAIGLFIL FQQLGTLNVQ ELLVRAPEHF KVGDFWIVLA TLMLLGGAVG KSAQLPLQTW
LADAMAGPTP VSALIHAATM VTAGVYLIAR THGLFALAPD ILHLVGIVGG VTLVLAGFAA
LVQTDIKRIL AYSTMSQIGY MFLALGVGAW EGAIFHLMTH AFFKALLFLA SGAVIVACHH
EQNIFKMGGL WKKLPLAYAS FIVGGAALSA LPLLTAGFYS KDEILWEAFA SGNNGLLYAG
LVGAFMTSLY TFRLIFIAFH GEAKTEAHAG HGIAHWLPLS VLIVLSTFIG ALITPPLAGV
LPQSVGHAGG EAKHSLEIAS GAIALAGILL AALLFLGKRR LATAIANSAP GRFLSAWWFA
AWGFDWIYDK LFVKPYLAIS HVLRSDPFDR TIGLIPRLVK GGHDTMSRTE TGQLRWYAAS
IAVGAVLVLG AVVLVAI
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