Gene Psyr_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3172 
Symbol 
ID3368694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3798750 
End bp3799751 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content62% 
IMG OID637653518 
Producthypothetical protein 
Protein accessionYP_236242 
Protein GI66046401 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0547] Anthranilate phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.102896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.287439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATT ACGCTGCGCT TGTCACTGAA ACACCTGAAG AACATCCCTT TGCGGCGTTC 
GTTCGCATTC TGGGCAAAGG CAAACGTGGC GCGCGCAACC TGACTCGCGA GGAAGCACGG
GAAGCCATGG GCATGCTGCT CGATGAGAAA GTCGAGGACA CCCAGCTCGG GGCTTTTCTG
ATGCTGCTGC GCCACAAGGA AGAAAGTCCC GAGGAACTGG CAGGGTTTAC CGAAGCGGTG
CGCGAACGTC TCAACGCTCC CGCCATGCAA GTCGACATCG ACTGGCCAAC CTATGCCGGG
AAAAAGCGTC ACCTGCCGTG GTATTTGCTG GCGGCCAAAT GCCTGGCGCA AAACGGCGTC
AGGATCCTCC TGCACGGCGG CGGCGCGCAT ACCGCAGGGC GTCTGTACAC CGAGCAACTG
CTGGACCTGC TGAAGATTCC TCTGTGCCGC AACTGGTCAG CGGTCAAGAC CTCGCTCGAG
CAAGAACAGC TGGCGTTCAT TCCGCTCGCC GACTGGGCAC CGCAGTTGCA GCGCATGATC
GACCTGCGCA ACACGCTGGG GCTGCGCTCG CCCATTCACT CGCTGGCGAG GATTCTCAAT
CCGCTGCAGG CGCGTTGCGG CCTGCAAAGC ATTTTTCACC CGGGCTATCA AAGCGTGCAT
CGCGATGCCA GCAGCCTGCT CGGCGACAAC GCCATCGTGG TCAAGGGTGA TGGCGGCGAA
ATCGAGATCA ACCCCGACAC CATCAGCCAC CTGTACGGCA CCACCGGCGG CCAGCCGTGG
GATGAAGAAT GGCCAGCGCT CTCACCGCGC CGCCACGTAA AACCGGCAAC GCTCGACCCG
CAGCAGCTGC TGGCCTTGTG GCGAGGAGAA ATCGAAGACA GTTACCCGCA ACTGGCCTTG
ATATCGACCA TGGCGCTCGC CTTGCGCGGC CTGGGCGTCG ATCGCGACGA GGCCTTCGCC
CAGGCGCAGG TATTCTGGGA TCGCCGCAAC ATCAATCTGT GA
 
Protein sequence
MNDYAALVTE TPEEHPFAAF VRILGKGKRG ARNLTREEAR EAMGMLLDEK VEDTQLGAFL 
MLLRHKEESP EELAGFTEAV RERLNAPAMQ VDIDWPTYAG KKRHLPWYLL AAKCLAQNGV
RILLHGGGAH TAGRLYTEQL LDLLKIPLCR NWSAVKTSLE QEQLAFIPLA DWAPQLQRMI
DLRNTLGLRS PIHSLARILN PLQARCGLQS IFHPGYQSVH RDASSLLGDN AIVVKGDGGE
IEINPDTISH LYGTTGGQPW DEEWPALSPR RHVKPATLDP QQLLALWRGE IEDSYPQLAL
ISTMALALRG LGVDRDEAFA QAQVFWDRRN INL