| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3141 |
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| Symbol | |
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| ID | 3368662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3766783 |
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| End bp | 3769113 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637653486 |
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| Product | type II and III secretion system protein:NolW-like |
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| Protein accession | YP_236211 |
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| Protein GI | 66046370 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.529282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.96586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTACCT TTTCTGGAGT TCCTGCCATC GCTACCTTGC GCACACCCTT GCTTTGCCTG
GCCACCGCCG TCGCCCTTGG CGGCTGCGCG TCACAGTCAG ACACACTCGA TCCCGACAAT
GGCATGCTGC AGGAAGCGCT CCAGGGAACC GGTTCACAAC GTCCGCCGGT AGACCCGCGC
AGCGAAAGAC CGCCCGTCGA GCCACCTTCC CAGCAGACGA CGAGCTCGCC GCAGCGGCAG
ATCATCAAAG GCAACCAGCG TTTCATCCGT CAGCCCGCCG CTGCTCCCGC AGCGCGTCAG
GCCGAGACCG GTGACATCGT CTTCAACTTC ACCAATCAGC CGATTCAGGC GGTGATCAAC
AGCATCATGG GCGATCTGCT GCACGAGAAT TACAGCATTG CCCAGGGTGT GAAGGGCGAT
GTGAGCTTCT CGACGTCCAA GCCGGTCAAC AAGCAGCAGG CGCTGTCGAT TCTCGAGACG
CTGCTGTCCT GGACCGACAA CGCGATGATC AAGCAGGGCA ATCGCTACGT GATCCTGCCG
TCGAATCAGG CGGTAGCGGG CAAGCTGGTC CCGGAAATGC GCGTGGCGCA ACCTTCGGCC
GGCATGTCGG CGCGGCTGTT CCCGCTGCGC TACATCTCGG CGACCGAGAT GCAGAAGCTG
CTCAAGCCGT TCGCCCGGGA GAACGCCTTT CTGCTGGTCG ACCCGGCGCG CAACGTGCTC
AGCCTGGCCG GTACTCCGGA AGAGCTGGCC AACTATCAGG ACACCATCGA CACCTTCGAT
GTGGACTGGC TCAAAGGCAT GTCTGTCGGT GTTTTCGGCC TGCAACGTGC CTCGGTTGGC
GAACTGATGC CCGAGCTGCA GAAAATGTTC GGCCCGGAAA GCGGCATGCC GCTGGCGGGC
ATGGTGCGTT TCCTGCCGAT CGAGCGGACC AACTCGGTGG TGGCGATTTC CTCGCAGCCT
GAATACCTGC ACGAAGTCGG CGAGTGGATT CACACCATCG ATGAGGGCGG TGGCAACGAG
CCGCAGATGT ATGTGTATGA CGTGCGCAAC ATGAAGGCCA CCGATCTGGC CAAGTACCTG
CGGCAGATCT ACGGCACCGG CGCCATCAAG GATGACTCGC CGGCCAAGGT CGCACCGGGG
CTGCGCACCA CCACCTTGTC ATCGCTCAAC TCCAGTGGCG GCAGCGGTGT GGGCGGCATG
AGCAGCTCAA ATGGTCTGGG CAGCAACGGC GGCGGCATGG GTAATGGCGG AGGCTTTGGC
AACAGTCAGA GCATGAACAA CAGCCAGAAT AGCGCCGACA GCGAGTCGGA AGGCGACGAT
CAGGGCGGCG GCGATTCGGA TTCGGACTCG GCCAGCCAGG ACGGTAGCGG CTCGTCTGGC
GCCAGTAAGT CGCTGGACGC CAGCACCCGC ATCACTGCGC AGAAGAGCAG CAACCAGTTG
CTGGTACGCA CGCGTCCGGC GCAATGGAAG GAAATCGAAT CGGCCATCAA ACGCCTCGAT
AATCCACCGC TGCAAGTGCA GATCGAGACG CGCATTCTGG AAGTCAAACT GACCGGCGAA
CTGGACATGG GCGTGCAGTG GTACCTCGGG CGTCTGGCGG GCAATTCGGG TACCACCGGC
AACGTCACCA ATACCGCTGG CAGTCAGGGG GCGATCGGTA CTGGCGGGGC CGCGCTGGCC
TCTACTGACG CGTTCTTCTA TTCCTTTGTC AGCAACAACC TGCAGGTCGC CTTGCGCGCC
CTCGAAACCA ACGGCCGCAC GCAGGTCCTG TCGGCGCCTT CGCTGGTGGT CATGAACAAC
CAGCAGGCGC AGATTCAGGT CGGCGACAAC ATCCCGATCA GCCAGACCTC GATCAACACC
AACACCAATA CCGGCACCAC ATTGAGCAGT GTCGAGTATG TGCAGACTGG CGTGATTCTC
GATGTCGTGC CGCGCATTAA TCCGGGCGGC CTGGTGTATA TGGATATCCA GCAGCAGGTC
AGTGATGCGG ACAGCAGCGG CACTACCGAC GCCAACGGCA ACCCGCGTAT TTCCACGCGC
TCGGTCGCTA CGCAAGTTGC GGCGCAGAGT GGTCAGACGG TGTTGCTGGG CGGATTGATC
AAGCAGGATA ACGCGGAGAC GGTCAACGCC GTGCCGTACC TTGGGCGCAT CCCCGGTCTG
CGCTGGTTGT TTGGCAATAC CAGCAAATCC AAGGACCGCA CCGAGCTGAT CGTGCTGATC
ACGCCAAGGG TCATCACCAG CAGCAGCCAG GCGCGCCAGG TGACGGATGA TTACCGTCAG
CAGATGCAAC TGCTCAAGCC CGAGGTCTCG CGGACCAGCA TGCAGAACTG A
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| Protein sequence | MGTFSGVPAI ATLRTPLLCL ATAVALGGCA SQSDTLDPDN GMLQEALQGT GSQRPPVDPR
SERPPVEPPS QQTTSSPQRQ IIKGNQRFIR QPAAAPAARQ AETGDIVFNF TNQPIQAVIN
SIMGDLLHEN YSIAQGVKGD VSFSTSKPVN KQQALSILET LLSWTDNAMI KQGNRYVILP
SNQAVAGKLV PEMRVAQPSA GMSARLFPLR YISATEMQKL LKPFARENAF LLVDPARNVL
SLAGTPEELA NYQDTIDTFD VDWLKGMSVG VFGLQRASVG ELMPELQKMF GPESGMPLAG
MVRFLPIERT NSVVAISSQP EYLHEVGEWI HTIDEGGGNE PQMYVYDVRN MKATDLAKYL
RQIYGTGAIK DDSPAKVAPG LRTTTLSSLN SSGGSGVGGM SSSNGLGSNG GGMGNGGGFG
NSQSMNNSQN SADSESEGDD QGGGDSDSDS ASQDGSGSSG ASKSLDASTR ITAQKSSNQL
LVRTRPAQWK EIESAIKRLD NPPLQVQIET RILEVKLTGE LDMGVQWYLG RLAGNSGTTG
NVTNTAGSQG AIGTGGAALA STDAFFYSFV SNNLQVALRA LETNGRTQVL SAPSLVVMNN
QQAQIQVGDN IPISQTSINT NTNTGTTLSS VEYVQTGVIL DVVPRINPGG LVYMDIQQQV
SDADSSGTTD ANGNPRISTR SVATQVAAQS GQTVLLGGLI KQDNAETVNA VPYLGRIPGL
RWLFGNTSKS KDRTELIVLI TPRVITSSSQ ARQVTDDYRQ QMQLLKPEVS RTSMQN
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