Gene Psyr_3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3128 
Symbol 
ID3368649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3750276 
End bp3751673 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content61% 
IMG OID637653473 
Productsensor histidine kinase 
Protein accessionYP_236198 
Protein GI66046357 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.850731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTGC CGAACCCGTC TGACGGCTGG CGATCATCCA CGAGTCGATT ACTGGCGCTG 
TACAGCTCGC TGTTCGTAGC CTGGAGCGTG ATTCTGCTTG GCGTCCTGTA TTGGGAGGTG
ACGTCTTATC TGGACACCCT CGCCCGCCAG TCGCTCACCC ATCGCCAGCA ACTGTTTTCG
CGCTTCGAGG GCCAGGGTCT GGTGGACGCT CTGGCCACCA GCATGACCTT CGATACCCGT
TCGGTGGATG CCTACGGTCT GTTCGACGAG AACTTCCGCC CGGTTGCCGG GCCTATCACC
AGCGTCCCGA AAAACCTGCC TATCGACGGC CAGATTCATG TACTGAACGA TTGCATCGAA
TCGGATGATC CAGGCATGCC GCAAGGCAGT TGCGATGCGA TCGTCAATCG CACGTCGGAC
GGCCGCTGGC TGGTGCTGGT TCGCGAGAAC GGCTCGCTGT TTGCGGTGAG CACGCTGATC
CTGCATGCCT TGCTGTGGGG CATCTCGCTG ACCATTATTC CCGGTGTTGC CGGCTGGCAT
TTACTGCGCC GCAGGCCGTT GCGGCGTATC CGCGCGATTC AGGCCAGCGC CGAATCGATC
ATCGCCGGCG ACATGGCCGG CCGTCTGCCG GTCTCCAACA GGCGCGATGA ACTGGACATG
CTGGCGGTGA TCGTCAACGC CATGCTCGAC CGTATCGAAA AGCTCATGAA CGAGGTCAAG
GGCGTTTGCG ACAATATCGC CCATGACCTG CGCACACCGC TGACCCGCTT GCGTGCGCAG
CTTTACCGTA TTCAGCAGCA GTCAGCACAC GATTCGACCC ATGCCACGCA GATTGCCCAG
GTCATCAGCG AAGCTGACAC GCTGATGGCA CGCTTCCGCG GACTGTTGCG CATTTCCGAG
CTGGAAGACC GCCAGCGGCG CTCGGCATTC GTTGAACTGG AACTGCGTCC ATTGCTGCAG
GAGCTACATG ATTTCCACCT GCCGCTGGCT GAAGAAGACC AGATCACCCT GATACTCGAC
CTGCATGAAC CGCTACCCAC TCTGGTAGGC GACCGCGCTC TGCTGTTCGA AGCACTGACC
AACCTGCTGG GCAACGCAAT CAAGTTCACC CCGGGCGGCG GAATCGTCAA AGTCAGCGCC
TACCCTGCCC CCGGCGGCAC CACGCCGTGC ATCGAGGTGC AGGATTCCGG GCCTGGCATC
CCCGTCGCCG AGCGCGCGGC TGTCTTTCAG CGCTTCTATC GCAGTGAGGC CGGCACCGAG
CAAAGCGGCT TCGGCCTCGG CCTCTCCGTA GTGGCCGCAA TCGTCAATCT GCACGGTTTT
ACACTGCAGA TAGGCACCAG CGAATACGGC GGCGCAAGTT TGCTGCTGGA ATGCCGCACG
GTGAATACGC TGGCCTGA
 
Protein sequence
MSLPNPSDGW RSSTSRLLAL YSSLFVAWSV ILLGVLYWEV TSYLDTLARQ SLTHRQQLFS 
RFEGQGLVDA LATSMTFDTR SVDAYGLFDE NFRPVAGPIT SVPKNLPIDG QIHVLNDCIE
SDDPGMPQGS CDAIVNRTSD GRWLVLVREN GSLFAVSTLI LHALLWGISL TIIPGVAGWH
LLRRRPLRRI RAIQASAESI IAGDMAGRLP VSNRRDELDM LAVIVNAMLD RIEKLMNEVK
GVCDNIAHDL RTPLTRLRAQ LYRIQQQSAH DSTHATQIAQ VISEADTLMA RFRGLLRISE
LEDRQRRSAF VELELRPLLQ ELHDFHLPLA EEDQITLILD LHEPLPTLVG DRALLFEALT
NLLGNAIKFT PGGGIVKVSA YPAPGGTTPC IEVQDSGPGI PVAERAAVFQ RFYRSEAGTE
QSGFGLGLSV VAAIVNLHGF TLQIGTSEYG GASLLLECRT VNTLA