| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3104 |
|---|
| Symbol | |
|---|
| ID | 3368625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 3721691 |
|---|
| End bp | 3722575 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637653449 |
|---|
| Product | phosphate ABC transporter permease |
|---|
| Protein accession | YP_236174 |
|---|
| Protein GI | 66046333 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0581] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.354124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGG ATGTGACCGG CAGCGAGCAC CTGTATCGGG TTCGCAGTAT CAAGAACAAG
ATTGCGATGG TACTCAGCTG TGGCGCCACC GCCTTCGGCC TGCTGTGGCT GGTGTGGATT
CTGCTGACCA CCATCATCAA GGGTATCGAC GCGCTCAACC TGCAACTGTT CACCGGCATG
ACTCCGCCGC CGGGCACCGA GGGTGGTCTG GCCAACGCGT TCTACGGCAG CGTGCTGATG
TCCGGCATCG GCCTGCTGAT CGGTACGCCG ATCGGCCTGA TGGCCGGCAT CTGGCTGGCC
GAGTTTGCCC GCTACACCAA ACTGGGCAAC ACGGTTCGCT TCATCAACGA CATCCTGCTC
TCGGCACCTT CCATCGTGCT CGGCCTGTTC GTCTACACCG TCGTGGTTCT GCCACTCAAC
GCGGTGACAG GCCATCAGGT GGGCTTTTCG GCGATTGCCG GCGCGCTGGC GCTGGCATTG
CTGGTGATCC CGGTGGTGGT GCGTACCACT GACGAAATGA TGCAATTGCA ACCCTCGACC
ATGCGTGAAG CTGCGCTGGC GCTGGGTGTG CCGCAATGGA AGCTGACCCT GCAAATCGTC
CTGCGCGCAG CCAAGGCCGG TGTGGTAACC GGCGTATTGC TCGCATTGGC ACGCATCACC
GGCGAAACCG CGCCGCTGCT GTTCACCGCT TTCGGCAATC AGTTCTGGAG CAGCGATCTG
CTCAAACCCA TCGCCAGTGT TCCGGTGGTG GTTTTCCAGT ACGCCATGAG CCCGTTCGAT
GACTGGCACT CCCTGGCATG GGCCGGTGCG CTGGTCATGA CGTTGTTCGT ACTGATACTG
AGTCTGCTGT CTCGCTTAAT TCTTCTGCGC AATAGGGCGT CCTGA
|
|---|
| Protein sequence | MSKDVTGSEH LYRVRSIKNK IAMVLSCGAT AFGLLWLVWI LLTTIIKGID ALNLQLFTGM
TPPPGTEGGL ANAFYGSVLM SGIGLLIGTP IGLMAGIWLA EFARYTKLGN TVRFINDILL
SAPSIVLGLF VYTVVVLPLN AVTGHQVGFS AIAGALALAL LVIPVVVRTT DEMMQLQPST
MREAALALGV PQWKLTLQIV LRAAKAGVVT GVLLALARIT GETAPLLFTA FGNQFWSSDL
LKPIASVPVV VFQYAMSPFD DWHSLAWAGA LVMTLFVLIL SLLSRLILLR NRAS
|
|---|
| |