Gene Psyr_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2998 
Symbol 
ID3368518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3594701 
End bp3595714 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content65% 
IMG OID637653344 
Producthypothetical protein 
Protein accessionYP_236070 
Protein GI66046229 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATG CCTTGAGTGA GTTCCTCGAC TGGCGCAAGC ACGGTTATGC CGATACGCGT 
GCGCTGGGCG AGTGCTTACA GGCATTGGTC AATGAAGGTC TGGATCAGCT TCCCCTGCCT
GCCCGCGGTC AGACACTTGA GCGCTGGCGG GCGCTGGCCT GCGTTGCAGG TCACGACCTG
GGGTTGTGCA AGTTGTACGA GGGGCACACA GACGCCTTGG CGATCATGGC CGAACTGGGT
GCCCCGCCCC CCGAACAATT CAGCACCTGG GGCATGTGGG CGGCAGAGCC GCCACAGGCA
CGGGTGAATA TCAGCGGCGC AGGTGATGCC TTGCGCCTGC ACGGCCGCAA GGCATGGTGC
TCAGGCGCTT CGGCATTGAG CCATGCGTTG ATCACGGCAT GGGACGCCGA TCATCGCCAG
CAGCTGGTTG CAGTACGCCT TGACCAGCCC GGCGTACACA TGACCAGCGA CGGTTGGCGC
GCAGTGGGCA TGGGTGCGAC CGGCAGCATT GATGTGGTCT TCGACAACGC CATCGGTCAA
GCGATCGGTG CGCCGGGTGG CTATCTCGAC AGACCTGGCT TCTGGCAGGG CGGCATCGGC
ATTGCGGCCT GCTGGTACGG CGCATCACGC GCCATTGCGC AGCGCCTGCT GGCCCATGTC
GGCAAGCGCG AAGAGCCGCA CGCCCTCGCG CACCTCGGCG CTGCGGACGT AGCGCTGCAT
GCCGCAATCG ATGTGTTGCG CGCCGCTGCC ACGCACCTGG ATCAGGCCCC GACCGATAAT
GCCGAAGTGC TTGCCAGACG CTGCCGTGCT TATGTCGAGC AAGCCGCCGA TCTGGTGATC
CAGCATGTGG GCCGGGCCGT CGGCGCCGGG CCTTATTGCA AGGACCCGCA CTTTGCCCGG
CTGATCACCG ACCTGCCGGT TTTCCTGCGT CAGAGCCACG CCGAACAGGA CCTGGCGGCA
TTGGGCCAGT TGGCCGGCAA GGCGTTGCCC GCTGCACGGA CGTGGTCACT ATGA
 
Protein sequence
MIDALSEFLD WRKHGYADTR ALGECLQALV NEGLDQLPLP ARGQTLERWR ALACVAGHDL 
GLCKLYEGHT DALAIMAELG APPPEQFSTW GMWAAEPPQA RVNISGAGDA LRLHGRKAWC
SGASALSHAL ITAWDADHRQ QLVAVRLDQP GVHMTSDGWR AVGMGATGSI DVVFDNAIGQ
AIGAPGGYLD RPGFWQGGIG IAACWYGASR AIAQRLLAHV GKREEPHALA HLGAADVALH
AAIDVLRAAA THLDQAPTDN AEVLARRCRA YVEQAADLVI QHVGRAVGAG PYCKDPHFAR
LITDLPVFLR QSHAEQDLAA LGQLAGKALP AARTWSL