Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2988 |
Symbol | |
ID | 3368508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3579407 |
End bp | 3580939 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653334 |
Product | glucose-6-phosphate 1-dehydrogenase |
Protein accession | YP_236060 |
Protein GI | 66046219 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.385814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCTGT CGCGTGGCAG TGCCGAGCAA AAAACCGAGG TAGCACCACC CACGACGCTG TTTCTGTTCG GTGCCCATGG CGACCTGGTC AAGCGCCTGT TGATGCCGGC GCTTTACAAC CTGTCACGCG ACGGTCTGGT GGATGAAGGG CTGCATATCG TCGGCGTCGA TCACAATGCG ATCAGCGATG CCGATTTTGC GAAAAAGCTC GAGAACTTCA TTCGTGATGA AGCCGCCGGC AAGGTTGCCG GCGGCGGCAA GGATCCGCTA GATCCTGCGT TGTGGAGCAA GCTGGCCGAG CGCATCAGTT ACGTGCAGGG CGACTTCCTC GACGATTCCA CCTATCAGGA CATCGCCAGC AAGATCGAGA GCACCGGCAC CGCGAACGCG GTGTTTTATC TGGCCACCGC GCCGCGGTTT TTCAGTGAGG TCGCCCAGCG CCTGGGCTCG TCAGGTTTGC TGCAGGAAAC CGAAGAAGGG TTTCGTCGTG TCGTGATCGA AAAGCCGTTC GGCTCCGATC TGGCCAGTGC GGTCGAGCTC AATGGCTGCC TGCTCAAGGT CATGAGCGAG AAGCAGATTT ATCGGATCGA CCATTACCTG GGCAAGGAGA CGGTGCAGAA CATTCTTGTC AGCCGTTTCT CCAATGGCCT GTTCGAGTCG TTCTGGAACA ATCACTACAT CGATCACGTT CAGATCACGG CTGCGGAAAC CGTAGGCGTT GAAACCCGTG GCAGCTTTTA CGAGCACACC GGTGCCTTGC GTGACATGGT GCCCAATCAC CTGTTCCAGC TGCTGGCGAT GGTGGCGATG GAGCCGCCTG CCGCTTTCGG TGCCGATGCC GTTCGCGGTG AGAAAGCCAA GGTGGTCGGC GCGATCCGGC CCTGGAGCCA GGAGGAAGCC CTGGCCAATT CGGTGCGTGG CCAGTACGCG AAGGGCGTGA TGGGCGACAG GCAGGTCGTC GGTTATCGTC AGGAAGATCG CGTGGAGCCG GACAGCAGCA CCGAGACCTA CGTTGCACTG AAGGTCATGG TCGACAACTG GCGCTGGGTG GGTGTGCCGT TCTACCTGCG CACCGGCAAG CGTATGAGCG CACGCAGCAC CGAAATCGCC ATTTGCTTCA AGCCTGCTCC GTACGCGCAG TTCCGCGATA CCGAGGTCGA CCGGCTCAAG CCCAACTACC TGCGGATCCA GATCCAGCCT AACGAAGGCA TGTGGTTCGA CCTGTTTGCC AAGCGTCCAG GCCCGAAACT GGAGATGGAA GATATCGCGT TGGGCTTCGC CTACAAGGAT TTCTTCGAGA TGCAGCCCTC TACCGGGTAC GAAACCCTCA TTTATGACTG CCTGACCGGT GATCAGACGC TCTTCCAGCG TGCCGACAAC ATCGAGAACG GCTGGCGTGC CGTGCAGCCG TTCCTCGATG CCTGGGCCGC GCAGCCGCAA GTGCAGCTTT ACGAGGCTGG CAAGGATGGC CCGCAAGCGG GTGAAGAGCT GCTGAGTCGT GACGGTCGGG AATGGAGAGA ATTGAATGTC TGA
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Protein sequence | MGLSRGSAEQ KTEVAPPTTL FLFGAHGDLV KRLLMPALYN LSRDGLVDEG LHIVGVDHNA ISDADFAKKL ENFIRDEAAG KVAGGGKDPL DPALWSKLAE RISYVQGDFL DDSTYQDIAS KIESTGTANA VFYLATAPRF FSEVAQRLGS SGLLQETEEG FRRVVIEKPF GSDLASAVEL NGCLLKVMSE KQIYRIDHYL GKETVQNILV SRFSNGLFES FWNNHYIDHV QITAAETVGV ETRGSFYEHT GALRDMVPNH LFQLLAMVAM EPPAAFGADA VRGEKAKVVG AIRPWSQEEA LANSVRGQYA KGVMGDRQVV GYRQEDRVEP DSSTETYVAL KVMVDNWRWV GVPFYLRTGK RMSARSTEIA ICFKPAPYAQ FRDTEVDRLK PNYLRIQIQP NEGMWFDLFA KRPGPKLEME DIALGFAYKD FFEMQPSTGY ETLIYDCLTG DQTLFQRADN IENGWRAVQP FLDAWAAQPQ VQLYEAGKDG PQAGEELLSR DGREWRELNV
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