Gene Psyr_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2942 
Symbol 
ID3368462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3533112 
End bp3533873 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content60% 
IMG OID637653288 
ProductABC transporter 
Protein accessionYP_236014 
Protein GI66046173 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.769587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAT TGATCGAACT GTCCGGCTTC AGCAAAAACT TTGGTGACAC CCCGGTGCTC 
CGAGACATCG ACCTGAGCGT GAAAGAGGGC GAAGTCGTGG TGATTCTCGG CCCCAGCGGG
TGTGGCAAGA GCACCTTGCT GCGCTGCCTC AACGGCCTCG AACTCGGTCA TGCCGGCAGC
CTGCACTTTG CCGGCAAGGC GCTGCCCGCC AACGCCGACT GGCGGCTGGT CAGGCAACAA
ATCGGCATGG TTTTTCAGAG CTATCACCTG TTTCCGCACA TGACCGTACT CGACAACATT
CTGCTCGGCC CGTTGCGCGT GCAAAAACGT AGTGCAGTCG AGGCTCGTCA GCAGGCCGAG
GCGTTACTGC AGCGGGTGGG CCTGGCGGAC AAGCGTGACG CCTATCCGCG CGAGCTGTCC
GGCGGCCAGC AGCAGCGTAT CGCTATCGTG CGCGCGCTGT GCATGAACCC AAAAGTCATG
CTGTTCGATG AAGTGACCGC AGCCCTCGAT CCGGAAATGG TCAAGGAAGT GCTGGAAGTG
ATCCTCGACC TCGCCCAAGG CGGCATGACC ATGCTCATCG TCACTCATGA AATGGCCTTC
GCCCGAGCGG TGGCCGACCG AATCCTGTTC ATGGACCGCG GCCGGATCGC GGAACAGAAC
GACCCCGAAA CTTTCTTCAG CGCCCCGCAG ACCGCACGCG CGCAGCAGTT CCTGGAGAGG
TTCTCCTACG TGGAAAACAT GCCAAAAAGG AAAGCATCGT GA
 
Protein sequence
MSTLIELSGF SKNFGDTPVL RDIDLSVKEG EVVVILGPSG CGKSTLLRCL NGLELGHAGS 
LHFAGKALPA NADWRLVRQQ IGMVFQSYHL FPHMTVLDNI LLGPLRVQKR SAVEARQQAE
ALLQRVGLAD KRDAYPRELS GGQQQRIAIV RALCMNPKVM LFDEVTAALD PEMVKEVLEV
ILDLAQGGMT MLIVTHEMAF ARAVADRILF MDRGRIAEQN DPETFFSAPQ TARAQQFLER
FSYVENMPKR KAS