| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2885 |
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| Symbol | |
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| ID | 3368404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3461411 |
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| End bp | 3462967 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637653230 |
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| Product | xylose transporter ATP-binding subunit |
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| Protein accession | YP_235957 |
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| Protein GI | 66046116 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | [TIGR02633] D-xylose ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.700201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.945677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACT ACCTGTTGCA AATGAACGGC ATCGTCAAAT CCTTTGGCGG TGTAAAAGCG
CTCAACGGCA TCGATATCAC AGTGAAGCCC GGCGAGTGCG TCGGCCTGTG CGGCGAGAAC
GGCGCGGGCA AATCCACCTT GATGAAAGTC CTGTCGGCGG TCTATCCCTA CGGCACCTGG
GAGGGCGAAA TCCTGTGGGA CGGCCAACCG CTCAAGGCAC AGTCGATCAG TGAAACGGAA
GCGGCCGGGA TCGTCATCAT CCATCAGGAA CTGACGCTGG TCCCGGACCT GTCGGTGGCC
GAAAACATTT TTATGGGCCA CGAGCTGACG CTCCCCGGCG GGCGCATGAA TTACCCGGCC
ATGATGCACC GCGCCGAGTC GCTGATGCGT GAACTCAAAG TGCCTGACAT GAACGTGGCG
CTGCCGGTTT CGCAGTATGG CGGCGGCTAC CAGCAACTGG TGGAAATCGC CAAGGCGCTG
AACAAGAAGG CGCGCCTGTT GATTCTCGAC GAGCCCTCCT CGGCCCTGAC CCGCTCCGAA
ATCGAGGTGT TGCTGGACAT CATTCACGAC CTGAAGGCCA AGGGGGTCGC GTGCGTGTAC
ATCTCGCACA AACTCGATGA GGTGGCCGCC GTGTGCGACA CCGTTTCCGT CATCCGCGAC
GGCAAACATA TCGCCACCAC TGCAATGGCG GACATGGACA TTCCAAAGAT CATCACCCAG
ATGGTCGGAC GCGAAATGAG CAACCTCTAC CCCACCGAGC CGCATGATGT CGGCGAGGTG
ATTTTCGAAG CGCGGCATAT CACCTGCTAC GACGTCGATA ACCCCAGGCG CAAGCGCGTC
GACGACGTGT CATTCCTCCT CAGGCGCGGG GAAATCCTCG GCATCGCCGG GCTGGTGGGC
GCGGGCCGTA CCGAACTGGT ATCCGCCCTG TTCGGCGCCT ACCCCGGTCG GTACAGCGGT
GAAGTGTGGC TGAATGGCCA GGCGATCGAC ACGCGCACGC CGCTCAAATC GATCCGCGCC
GGCGTGTGCA TGGTCCCTGA AGACCGCAAG CGCCAGGGCA TCATTCCGGA CCTGGGCGTC
GGCCAGAACA TCACCCTCGC GGTCCTCGAC AGCTACTCGA ACATGACCCG CATCGACGCT
GAAGCCGAAC TGGGCAGTAT CGACCGGGAA ATCTCGCGCA TGCACCTCAA GACCGCCAGC
CCGTTTTTGC CAATCACCAG CCTGTCAGGC GGCAATCAGC AGAAAGCCGT GCTGGCGAAG
ATGCTGCTCA CCCGCCCGCG CGTTCTGATT CTCGACGAGC CTACCCGCGG CGTCGATGTC
GGTGCCAAGT ACGAGATCTA CAAGCTGATG GGCGCGCTGG CAGCCGAGGG CGTGTCGATC
ATCATGGTGT CTTCGGAGCT GGCCGAAGTG CTGGGCGTGT CCGACCGTGT GCTGGTGATT
GGCGACGGCC AGTTGCGCGG CGACTTCATC AACCATGACC TGACTCAGGA GCAGGTCCTC
GCCGCTGCAC TCAGCCACTC CGATGCCCCT CACAATAATG CCCGGAAGAC CGCGTAG
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| Protein sequence | MSDYLLQMNG IVKSFGGVKA LNGIDITVKP GECVGLCGEN GAGKSTLMKV LSAVYPYGTW
EGEILWDGQP LKAQSISETE AAGIVIIHQE LTLVPDLSVA ENIFMGHELT LPGGRMNYPA
MMHRAESLMR ELKVPDMNVA LPVSQYGGGY QQLVEIAKAL NKKARLLILD EPSSALTRSE
IEVLLDIIHD LKAKGVACVY ISHKLDEVAA VCDTVSVIRD GKHIATTAMA DMDIPKIITQ
MVGREMSNLY PTEPHDVGEV IFEARHITCY DVDNPRRKRV DDVSFLLRRG EILGIAGLVG
AGRTELVSAL FGAYPGRYSG EVWLNGQAID TRTPLKSIRA GVCMVPEDRK RQGIIPDLGV
GQNITLAVLD SYSNMTRIDA EAELGSIDRE ISRMHLKTAS PFLPITSLSG GNQQKAVLAK
MLLTRPRVLI LDEPTRGVDV GAKYEIYKLM GALAAEGVSI IMVSSELAEV LGVSDRVLVI
GDGQLRGDFI NHDLTQEQVL AAALSHSDAP HNNARKTA
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