Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2879 |
Symbol | |
ID | 3368398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3454996 |
End bp | 3455427 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637653224 |
Product | VirK |
Protein accession | YP_235951 |
Protein GI | 66046110 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.149986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACATT CCTACGCCGC TGCACTGCTT GCTCTTTCAA TGCCAGGCCT CGCTCACGCA GGCGACGCGC TACCCACCTA CTCCGCCATT ACCCAGGCAT TGAATACCGG AGAATCGGTC GCCGTGGTGA TCGACCTGGG ACAATGCAAA TCCTCGATCG CCGGTGCCGA GCCGTCCAAA ACCAAAGGCG GCAAACGCAT CGATGCCTAC CGCATCACCC CCGACGGCAC CCTGGCGTTT TCGGACACTC ACTTCAGCCT CGATCGCGAT AACAAGCCCA TCGAGCAATT CATTCGCTAT CAGGTACGCT CGAACGGCAC AGCCACATTC AGCATGACCA CGCTGAATGT TCCTGGCTAT CAACAAGTGG GTACGCCGGT GAGTTATGAG TGTGCGATCA GCAAAGGACT GAGCTTTTTT GTCAGCCAGT AA
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Protein sequence | MKHSYAAALL ALSMPGLAHA GDALPTYSAI TQALNTGESV AVVIDLGQCK SSIAGAEPSK TKGGKRIDAY RITPDGTLAF SDTHFSLDRD NKPIEQFIRY QVRSNGTATF SMTTLNVPGY QQVGTPVSYE CAISKGLSFF VSQ
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