Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2821 |
Symbol | |
ID | 3368339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3395112 |
End bp | 3396773 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637653170 |
Product | hypothetical protein |
Protein accession | YP_235898 |
Protein GI | 66046057 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5377] Phage-related protein, predicted endonuclease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0954368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.878787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACGC ATAAAGTCAC CCAGGGCAGT GCCGAATGGC ACGCGCTCCG CGCCAACTAT CGCACCGCGT CTGAAGCACC GGTTATGATG GGCGCATCCA AGCAGATGAA GCGCACCGAG CTGCTTCATG CCAAGAAGAC CGGGCTCGAC CGGGACATTT CGTGGTGGGT CCAGAAGTAC TTGTTCGACA AGGGTCACGA AGCCGAAGCG CTGGCGCGAC CAATTCTCGA AGGTCGAATC GGCGAAGACC TGTTCCCGGT TGTGGGCACC GAAGGTGACC TGCTGGCCTC CCTCGACGGC TGCACAATGA TGGGCGAGAT CGTTTTCGAG CACAAAATGT GGAACGAGCA GCTCGCCGCC GACGTGCGTG CGGGCGATCT GGATGCGCAT TACTACTGGC AGCTGGAGCA GCAACTGCTG GTGTCAGGTG CTGAGAAAGT GATTTTCGTT TGCTCGGACG GGACCGAAGA CAACTTCGTC TCGATGGAGT ACTTCCCGGT GAACGGTCGG GCGGCGAAAC TGGTCGCCGG CTGGAAACAG TTCGAAGTCG ACCTTGAAGC GTATGAGCCA ACTGAGGCCG TGGTGGAGGC AGTTGGGAAG ACTCCGGACG CGCTGCCAGC GCTGCGCATC GAAGTAACCG GAATGGTCAC TGCGAGCAAC CTGGAGCAGT TCAAGGCCCA TTCGCTGGCC GTGTTTTCGG CGATCAACAC TGACCTGCAG ACCGACCAGC ACTTCGCTGA TGCAGAGAAA ACAGTGAAGT GGTGTGGCGA GGTCGAGGAG CGCCTGGAAG CAGCCAAGCA ACATGCGCTG AGCCAGACGG AAACCATCGA CGCCCTCTTC CGCACCATCG ACGAAATATC GGAGCAGGCC CGTCGCAAAC GGCTTGAGCT GGACAAACTG GTGAAAGCTC GCAAGGTGGC CATTCGCGAA GAGATCGTTC TGAAAGCGAA AGCAGCGCTG CGTGATCATC TGGACAAGAT CAACACCTCG TTCGGCGGCA AGGTGCGGCT GCCGGAGATC CCCGCGGACT TCGCCGGCGC GATCAAAGGC AAAAAAAATA TCGCCAGTCT GCGTGACGCC GCCGACTCTG AACTGGCCCG GGCCAAGATC GAGGCCAGCC AGATCGGCGA CGGTATCCGC GCCAACTTGG AAAGCTTGCG CTCGCTCGCC GTGGATCATG CGTTTCTGTT CAACGATGCT CAGCAGATCG TGCTCAAGAA CAATGACGAC CTGGTGGCCC TCATCAAGGT GCGGATCAAC GAGCACAAGC AGGCCGAGGA AGCGAAAGAG CTGGCGCAGC GTGAACGTAT TCGTGCTGAA GAATCAGCGA AGCTTGCGGC TGCCGCCGAA GCGGAACAAG TTGCCGAAGC GGAAAAGGCA ACAGCCAACG CGCCCGCGCC GCAAGCTGCT GAGGCATCCA AACCAGTCGA ACAACCAGCT CCGAGAATGT CGGCCGTCAC CCCATCTGCG AAGGTGCCGC CCAAGCCTAC AAAGCTCGAA GCGAACGTCA CCGACCTTCA TGCGCTGGTA AAAGCCGTCT ACGAAGGTCG TGCGCCGATA TCGGTCCTCA CAGTGAACTG GGGCGCGCTG GACGACCTTG TCCACATTCA AGGCGCTGAC TTCCAAATGG ACGGAGTAAC CATCACGCAG GTGGCAGCAT GA
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Protein sequence | MKTHKVTQGS AEWHALRANY RTASEAPVMM GASKQMKRTE LLHAKKTGLD RDISWWVQKY LFDKGHEAEA LARPILEGRI GEDLFPVVGT EGDLLASLDG CTMMGEIVFE HKMWNEQLAA DVRAGDLDAH YYWQLEQQLL VSGAEKVIFV CSDGTEDNFV SMEYFPVNGR AAKLVAGWKQ FEVDLEAYEP TEAVVEAVGK TPDALPALRI EVTGMVTASN LEQFKAHSLA VFSAINTDLQ TDQHFADAEK TVKWCGEVEE RLEAAKQHAL SQTETIDALF RTIDEISEQA RRKRLELDKL VKARKVAIRE EIVLKAKAAL RDHLDKINTS FGGKVRLPEI PADFAGAIKG KKNIASLRDA ADSELARAKI EASQIGDGIR ANLESLRSLA VDHAFLFNDA QQIVLKNNDD LVALIKVRIN EHKQAEEAKE LAQRERIRAE ESAKLAAAAE AEQVAEAEKA TANAPAPQAA EASKPVEQPA PRMSAVTPSA KVPPKPTKLE ANVTDLHALV KAVYEGRAPI SVLTVNWGAL DDLVHIQGAD FQMDGVTITQ VAA
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