Gene Psyr_2821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2821 
Symbol 
ID3368339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3395112 
End bp3396773 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content59% 
IMG OID637653170 
Producthypothetical protein 
Protein accessionYP_235898 
Protein GI66046057 
COG category[L] Replication, recombination and repair 
COG ID[COG5377] Phage-related protein, predicted endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0954368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.878787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC ATAAAGTCAC CCAGGGCAGT GCCGAATGGC ACGCGCTCCG CGCCAACTAT 
CGCACCGCGT CTGAAGCACC GGTTATGATG GGCGCATCCA AGCAGATGAA GCGCACCGAG
CTGCTTCATG CCAAGAAGAC CGGGCTCGAC CGGGACATTT CGTGGTGGGT CCAGAAGTAC
TTGTTCGACA AGGGTCACGA AGCCGAAGCG CTGGCGCGAC CAATTCTCGA AGGTCGAATC
GGCGAAGACC TGTTCCCGGT TGTGGGCACC GAAGGTGACC TGCTGGCCTC CCTCGACGGC
TGCACAATGA TGGGCGAGAT CGTTTTCGAG CACAAAATGT GGAACGAGCA GCTCGCCGCC
GACGTGCGTG CGGGCGATCT GGATGCGCAT TACTACTGGC AGCTGGAGCA GCAACTGCTG
GTGTCAGGTG CTGAGAAAGT GATTTTCGTT TGCTCGGACG GGACCGAAGA CAACTTCGTC
TCGATGGAGT ACTTCCCGGT GAACGGTCGG GCGGCGAAAC TGGTCGCCGG CTGGAAACAG
TTCGAAGTCG ACCTTGAAGC GTATGAGCCA ACTGAGGCCG TGGTGGAGGC AGTTGGGAAG
ACTCCGGACG CGCTGCCAGC GCTGCGCATC GAAGTAACCG GAATGGTCAC TGCGAGCAAC
CTGGAGCAGT TCAAGGCCCA TTCGCTGGCC GTGTTTTCGG CGATCAACAC TGACCTGCAG
ACCGACCAGC ACTTCGCTGA TGCAGAGAAA ACAGTGAAGT GGTGTGGCGA GGTCGAGGAG
CGCCTGGAAG CAGCCAAGCA ACATGCGCTG AGCCAGACGG AAACCATCGA CGCCCTCTTC
CGCACCATCG ACGAAATATC GGAGCAGGCC CGTCGCAAAC GGCTTGAGCT GGACAAACTG
GTGAAAGCTC GCAAGGTGGC CATTCGCGAA GAGATCGTTC TGAAAGCGAA AGCAGCGCTG
CGTGATCATC TGGACAAGAT CAACACCTCG TTCGGCGGCA AGGTGCGGCT GCCGGAGATC
CCCGCGGACT TCGCCGGCGC GATCAAAGGC AAAAAAAATA TCGCCAGTCT GCGTGACGCC
GCCGACTCTG AACTGGCCCG GGCCAAGATC GAGGCCAGCC AGATCGGCGA CGGTATCCGC
GCCAACTTGG AAAGCTTGCG CTCGCTCGCC GTGGATCATG CGTTTCTGTT CAACGATGCT
CAGCAGATCG TGCTCAAGAA CAATGACGAC CTGGTGGCCC TCATCAAGGT GCGGATCAAC
GAGCACAAGC AGGCCGAGGA AGCGAAAGAG CTGGCGCAGC GTGAACGTAT TCGTGCTGAA
GAATCAGCGA AGCTTGCGGC TGCCGCCGAA GCGGAACAAG TTGCCGAAGC GGAAAAGGCA
ACAGCCAACG CGCCCGCGCC GCAAGCTGCT GAGGCATCCA AACCAGTCGA ACAACCAGCT
CCGAGAATGT CGGCCGTCAC CCCATCTGCG AAGGTGCCGC CCAAGCCTAC AAAGCTCGAA
GCGAACGTCA CCGACCTTCA TGCGCTGGTA AAAGCCGTCT ACGAAGGTCG TGCGCCGATA
TCGGTCCTCA CAGTGAACTG GGGCGCGCTG GACGACCTTG TCCACATTCA AGGCGCTGAC
TTCCAAATGG ACGGAGTAAC CATCACGCAG GTGGCAGCAT GA
 
Protein sequence
MKTHKVTQGS AEWHALRANY RTASEAPVMM GASKQMKRTE LLHAKKTGLD RDISWWVQKY 
LFDKGHEAEA LARPILEGRI GEDLFPVVGT EGDLLASLDG CTMMGEIVFE HKMWNEQLAA
DVRAGDLDAH YYWQLEQQLL VSGAEKVIFV CSDGTEDNFV SMEYFPVNGR AAKLVAGWKQ
FEVDLEAYEP TEAVVEAVGK TPDALPALRI EVTGMVTASN LEQFKAHSLA VFSAINTDLQ
TDQHFADAEK TVKWCGEVEE RLEAAKQHAL SQTETIDALF RTIDEISEQA RRKRLELDKL
VKARKVAIRE EIVLKAKAAL RDHLDKINTS FGGKVRLPEI PADFAGAIKG KKNIASLRDA
ADSELARAKI EASQIGDGIR ANLESLRSLA VDHAFLFNDA QQIVLKNNDD LVALIKVRIN
EHKQAEEAKE LAQRERIRAE ESAKLAAAAE AEQVAEAEKA TANAPAPQAA EASKPVEQPA
PRMSAVTPSA KVPPKPTKLE ANVTDLHALV KAVYEGRAPI SVLTVNWGAL DDLVHIQGAD
FQMDGVTITQ VAA