Gene Psyr_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2715 
Symbol 
ID3368232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3297028 
End bp3298422 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content61% 
IMG OID637653063 
Productmajor facilitator transporter 
Protein accessionYP_235792 
Protein GI66045951 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.528034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGGA GTCGCCTCTT GAATACCGTC CCTGGTACTA CGGACGTCAC GGTGCTTGCC 
CGTGCGGCCG CCAAGGTGAA ACGCCACGTG CTGCCGCTGT TCGTGGTGAT GTTCATCGTC
AATTACATCG ACCGGGTCAA TATCGGTTTC GTACGCAGCC ATCTGGAAAC CGATCTGGGT
ATCGGCGCAG CGGCCTACGG GCTGGGTGCA GGATTGTTCT TTGTCGGTTA CGCGCTGTTC
GAAGTCCCCT CCAACATGCT GTTGCAGCGC TACGGTGCCC GCGCCTGGCT GACCCGTATC
ATGTTCACCT GGGGCGCGGC CGCCATGGCC ATGGCGTTCG TCCAGGGCGA AACCAGCTTT
TACGTGCTGC GCTTCATTCT GGGCGCCGCC GAAGCCGGTT TCTTCCCCGG CATCATCTAT
TACTTCACCC AATGGCTACC CTCAAGTGAC CGCGGCAAGG CCATGGCGCT GTTTCTCAGC
GGCTCGGCGA TAGCCTCGGT GATTTCCGGA CCGGTGTCCG GCGCCCTGCT CGGTCTCGAG
GGCATGAACC TGCATGGCTG GCAGTGGATG TTCCTGATCG AAGGCTTCGC GTCGATCGTG
CTCTGCGGTT TCGTGTGGTT CTGGCTGCAA TCACATCCTC ATGAAGCCCG CTGGCTCAGT
GACGAAGAAA AAACCGCGCT CAGCACCGCC ATCGCCGAAG AGCAACGGCT GCGCGAAGCT
TCACAAACCG TCAGACCTTC GGTATTCCGA CTGTTGGCGG ACCGGCAGAT CCTGCTGTTC
TGCTTCATCT ACTTTTCCGT GGCACTGACC ATCTATGGCG CCACCTTCTG GCTGCCGAGC
ATGATCCGCA AGATGGGCAG TTTCAGCGAT TTCGAGGTCG GGCTGTTCAA TTCGATCCCG
TGGATCATCT CGATTGTGGC CATGTACGGC TTCGCAGCCC TGGCCGCACG CTTCAAGCAC
CAGCAGGCCT GGGTGGCGGT TACCCTGGTC ATCGCCGCCG CCGGCATGTT CATGTCCACG
GTGGGCGGTC CGGTGTTCGC CTTTGTCGCC ATCTGCTTCG CGGCAATCGG TTTCAAGGCC
GCGTCTGCGC TGTTCTGGCC AATCCCTCAA GGCTATCTGG ATGCACGCAT TGCTGCTGCG
GTCATTGCGC TGATCAACTC CATCGGCAAC CTGGGCGGTT TCGTCGCACC GACCACGTTC
GGCTTTCTGG AACAGACCAC CGGTTCGATT CAGGGCGGTC TGTATGGCCT GGCAGCGACA
TCGCTGCTCG CTGCCGTGGT GATCTTCTTC GCCCGCACCA CGCCACGCGG TGACCGCGGC
CGCCCGTCCA GGGCTGAGCG GCCCGCAGCG CTCAGCCCTG CCGTCAATGG CACCCCTTCC
AGCCTCAAAC CCTGA
 
Protein sequence
MNGSRLLNTV PGTTDVTVLA RAAAKVKRHV LPLFVVMFIV NYIDRVNIGF VRSHLETDLG 
IGAAAYGLGA GLFFVGYALF EVPSNMLLQR YGARAWLTRI MFTWGAAAMA MAFVQGETSF
YVLRFILGAA EAGFFPGIIY YFTQWLPSSD RGKAMALFLS GSAIASVISG PVSGALLGLE
GMNLHGWQWM FLIEGFASIV LCGFVWFWLQ SHPHEARWLS DEEKTALSTA IAEEQRLREA
SQTVRPSVFR LLADRQILLF CFIYFSVALT IYGATFWLPS MIRKMGSFSD FEVGLFNSIP
WIISIVAMYG FAALAARFKH QQAWVAVTLV IAAAGMFMST VGGPVFAFVA ICFAAIGFKA
ASALFWPIPQ GYLDARIAAA VIALINSIGN LGGFVAPTTF GFLEQTTGSI QGGLYGLAAT
SLLAAVVIFF ARTTPRGDRG RPSRAERPAA LSPAVNGTPS SLKP