| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2699 |
|---|
| Symbol | |
|---|
| ID | 3368216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 3278314 |
|---|
| End bp | 3279333 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637653047 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_235776 |
|---|
| Protein GI | 66045935 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0379527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.148969 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGCG ACGACCGTAT CGCCCCAGGT GCCCCCGTGT ACCACGAAAC TCATGCAGCG
GGTCCGCTGC TTAAACGAAT CTCCTGGAGT GCGATTCTGG CCGGTGTTGT TCTGGCCATG
GTTGTTTCGC TGTTGCTGAA CCTGTTGGGT ACGGCAATCG GAAGTGCCAG TATCGATCCC
ATGCAGGAAG CCAATCCATT GTCCGGCATT GGTACGGGCG CAGGTATCTG GGTCGTTGTA
AGCTCGGTGA TCTCGCTGTT CGTCGGCGGC TGGGCCGCTG GACGTCTGGC GCAGCGCGAA
GGTGCGTTTC ATGGCCTGCT GGTGTGGGCG AGCGTCTCGC TGATCACTGT TTATCTGGTC
TCCAGCGCAG TGACCGGCGT CGTGCGCGGC GGCCTTAACC TGGCAGGCAG CGGCATGTCG
GCACTGGGCA GCGGTATCGC ACAGGTGGCT CCGGCCGTTG GCAGCAAGAT TCAGGATCAA
TTGCGCGCCC AAGGCATTGA TTTCAATCTG GACGATATCC AGGGCGAAAT CGAAACAGCC
ATGCGTCAGA CCGGCAAGCC CGAGCTGAAC CCTGACAACG TCAAGCAGGA AGCGCAAGCG
ACTCAGCAAG ATGCGCAGAA TACTGCCAAG CAGAGCGCGC AGAACCCTCA GCAAGCTGAC
GAGCAATTGA GCGGCCTGAT GGATCGCATC AAAGCTAAAG GCGACCAGGC GTGGGACGCC
GCTGACCGTC AGGCGCTGGT CAATCTGATC AAGGCGCGTG GCAACAAGAC TGACGCCGAA
GCCAACCAGA TCGTCGATCA GGCTCAGGCC AGCTACCGTC AGGCGTATGC CAAGTATCAG
GAACTGAAAG CTCAGGCCGA ACAGAAAGCC CGCGAAGCGG CTGAAGTGAC CGCCAAGCGT
GTTTCGCAAG GTGCCTGGAT TCTGCTGATC ACGCTGGTGA TCTCGGGTCT GGTAGCTGCG
GGTGCAGGCG TACTGGGTCG TCGCACTCAG CCGCCAGCCA AGGTTGTTGC TGCGGTCTGA
|
|---|
| Protein sequence | MIRDDRIAPG APVYHETHAA GPLLKRISWS AILAGVVLAM VVSLLLNLLG TAIGSASIDP
MQEANPLSGI GTGAGIWVVV SSVISLFVGG WAAGRLAQRE GAFHGLLVWA SVSLITVYLV
SSAVTGVVRG GLNLAGSGMS ALGSGIAQVA PAVGSKIQDQ LRAQGIDFNL DDIQGEIETA
MRQTGKPELN PDNVKQEAQA TQQDAQNTAK QSAQNPQQAD EQLSGLMDRI KAKGDQAWDA
ADRQALVNLI KARGNKTDAE ANQIVDQAQA SYRQAYAKYQ ELKAQAEQKA REAAEVTAKR
VSQGAWILLI TLVISGLVAA GAGVLGRRTQ PPAKVVAAV
|
|---|
| |