Gene Psyr_2677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2677 
Symbol 
ID3368194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3248366 
End bp3249499 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content63% 
IMG OID637653025 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 
Protein accessionYP_235754 
Protein GI66045913 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0304583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.886958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTTT CCGAACGAGA TATCGCCGGG CGCCCAAGCC CCGACAGCAA CGTGCAGAAG 
CCCATTCTCG AAGGCATCGG CCTGAGCAAG CACTTTGCCG TGGAAAGCGG CCTTTTGCAG
CGGAAGAAGC CGCCGGTACA GGCCGTCAAT GAGGTCAACC TGTCAGTCCG CAAGGGCGAG
ACGCTGGCGT TGGTAGGCGA GTCCGGCTCG GGCAAATCCA CCCTTGGCCG CCTGCTGCTC
AACCTGCTGC AACCGACTGC GGGTGACGTG ATCTACGAGG GCCGCAACCT CGCCAACCTG
ACACCGGAAA AGCTGCGCCA GGTACGCCGT GACCTGCAGA TCATCTTCCA GGACCCGTTC
GCCTCGCTGA ATCCACGCAT GACCGTGGAA TCCATCGTTG GCGAACCAAT CTGGCTACAT
AGTCAGGCCA GCCGCAGCGA CCGTCAGGAA AGAGTCGCCG AGTTATTGCG CACCGTAGGC
CTTGCTCCTG AACACGGTGG TCGGCATCCC CATGAATTCT CCGGTGGCCA ACGCCAGCGC
ATCGGCATTG CCCGCGCACT GGCTTCCGAG CCACGCCTGA TCCTCGGTGA CGAGCCGGTC
TCGGCGCTGG ACGTTTCGGT GCAGGCGCAA GTGGTCAACC TGCTCGAAGA CCTCAAGCAT
CAATTCGGCC TGACTCTGGT GATTGTTGCC CATGGCCTCG CGGTGATTCG CCACATGAGC
GACCGCGTAG CAGTGATGTA CCTGGGTGAA ATCGTCGAAC AGGCGCCGGT CGACGCGCTG
TTCGAAAACC CCTTGCACCC TTATACCCAG GCGTTGATGG CCGCCGTGCC GGTCAGCCAC
CCTGACCTGC GCCAGCCGCG TCCGTTACTC GGCGGCGATA TGCCCAGCCC CAGCCGCCCG
CCTTCAGGCT GCCGCTTTCA TACCCGTTGC CCGCACGCTC GTGCGCTGTG CAAGGAGGCT
GCGCCGGTCA TGGAAACGGT CGAGGCCGAA CGCCAGGTCG CCTGCCACTT CTGGCGTGAA
ATCGCCAACG CAGGCAGCGC CACGCTGATC CTTCCGACAC CCAGCGCTGC CTACACCCAG
CGCCTGAATC TGTTCAAGCA CCATCAATCC CTTGCAGTGG AGAGCCAGCC ATGA
 
Protein sequence
MNLSERDIAG RPSPDSNVQK PILEGIGLSK HFAVESGLLQ RKKPPVQAVN EVNLSVRKGE 
TLALVGESGS GKSTLGRLLL NLLQPTAGDV IYEGRNLANL TPEKLRQVRR DLQIIFQDPF
ASLNPRMTVE SIVGEPIWLH SQASRSDRQE RVAELLRTVG LAPEHGGRHP HEFSGGQRQR
IGIARALASE PRLILGDEPV SALDVSVQAQ VVNLLEDLKH QFGLTLVIVA HGLAVIRHMS
DRVAVMYLGE IVEQAPVDAL FENPLHPYTQ ALMAAVPVSH PDLRQPRPLL GGDMPSPSRP
PSGCRFHTRC PHARALCKEA APVMETVEAE RQVACHFWRE IANAGSATLI LPTPSAAYTQ
RLNLFKHHQS LAVESQP