Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2677 |
Symbol | |
ID | 3368194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3248366 |
End bp | 3249499 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653025 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal |
Protein accession | YP_235754 |
Protein GI | 66045913 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0304583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.886958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCTTT CCGAACGAGA TATCGCCGGG CGCCCAAGCC CCGACAGCAA CGTGCAGAAG CCCATTCTCG AAGGCATCGG CCTGAGCAAG CACTTTGCCG TGGAAAGCGG CCTTTTGCAG CGGAAGAAGC CGCCGGTACA GGCCGTCAAT GAGGTCAACC TGTCAGTCCG CAAGGGCGAG ACGCTGGCGT TGGTAGGCGA GTCCGGCTCG GGCAAATCCA CCCTTGGCCG CCTGCTGCTC AACCTGCTGC AACCGACTGC GGGTGACGTG ATCTACGAGG GCCGCAACCT CGCCAACCTG ACACCGGAAA AGCTGCGCCA GGTACGCCGT GACCTGCAGA TCATCTTCCA GGACCCGTTC GCCTCGCTGA ATCCACGCAT GACCGTGGAA TCCATCGTTG GCGAACCAAT CTGGCTACAT AGTCAGGCCA GCCGCAGCGA CCGTCAGGAA AGAGTCGCCG AGTTATTGCG CACCGTAGGC CTTGCTCCTG AACACGGTGG TCGGCATCCC CATGAATTCT CCGGTGGCCA ACGCCAGCGC ATCGGCATTG CCCGCGCACT GGCTTCCGAG CCACGCCTGA TCCTCGGTGA CGAGCCGGTC TCGGCGCTGG ACGTTTCGGT GCAGGCGCAA GTGGTCAACC TGCTCGAAGA CCTCAAGCAT CAATTCGGCC TGACTCTGGT GATTGTTGCC CATGGCCTCG CGGTGATTCG CCACATGAGC GACCGCGTAG CAGTGATGTA CCTGGGTGAA ATCGTCGAAC AGGCGCCGGT CGACGCGCTG TTCGAAAACC CCTTGCACCC TTATACCCAG GCGTTGATGG CCGCCGTGCC GGTCAGCCAC CCTGACCTGC GCCAGCCGCG TCCGTTACTC GGCGGCGATA TGCCCAGCCC CAGCCGCCCG CCTTCAGGCT GCCGCTTTCA TACCCGTTGC CCGCACGCTC GTGCGCTGTG CAAGGAGGCT GCGCCGGTCA TGGAAACGGT CGAGGCCGAA CGCCAGGTCG CCTGCCACTT CTGGCGTGAA ATCGCCAACG CAGGCAGCGC CACGCTGATC CTTCCGACAC CCAGCGCTGC CTACACCCAG CGCCTGAATC TGTTCAAGCA CCATCAATCC CTTGCAGTGG AGAGCCAGCC ATGA
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Protein sequence | MNLSERDIAG RPSPDSNVQK PILEGIGLSK HFAVESGLLQ RKKPPVQAVN EVNLSVRKGE TLALVGESGS GKSTLGRLLL NLLQPTAGDV IYEGRNLANL TPEKLRQVRR DLQIIFQDPF ASLNPRMTVE SIVGEPIWLH SQASRSDRQE RVAELLRTVG LAPEHGGRHP HEFSGGQRQR IGIARALASE PRLILGDEPV SALDVSVQAQ VVNLLEDLKH QFGLTLVIVA HGLAVIRHMS DRVAVMYLGE IVEQAPVDAL FENPLHPYTQ ALMAAVPVSH PDLRQPRPLL GGDMPSPSRP PSGCRFHTRC PHARALCKEA APVMETVEAE RQVACHFWRE IANAGSATLI LPTPSAAYTQ RLNLFKHHQS LAVESQP
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