| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2644 |
|---|
| Symbol | |
|---|
| ID | 3368161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3212729 |
|---|
| End bp | 3214660 |
|---|
| Gene Length | 1932 bp |
|---|
| Protein Length | 643 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637652992 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_235721 |
|---|
| Protein GI | 66045880 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4694] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.382571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAA ATTTCCACGA GGAAGCCTCT CAACCAGGTG TATTCACACT GAACGAGGGA
AATATTGAAG CGGAGAAAGC CATAGCTGAC GCCGAAGCGG CTATCAACTT ACTTACCGGT
ACCCTCGATG CTCACATGAT GGCAGGCAAA GAGGCTAAGG CAGCTCAGGA GCTAGCCAAA
GATAAGCTTA AAGACAGTAT CTGGAAGCAC AAGACTCCTT TTGACAACAG CCCACTCGCC
TACTGCTTCA ATCGCCTTAA TACTAAGGAA CGAGTGCTTG AAGCAGTCGC ACAGGTGGCA
TTAGCGCCCA CGACGGATAC GCCTGACGCT CTACGTGCTG AGGCTGCAGC CCTTCACGGA
GCAAGTGATG CCGTGCTCCC GGCTATACCT TCGATAAAAT TTACAGGCGG TGAAATTGAA
GCAGACCTGA TCTTAGTAGA GGTAATTTCA GGTAGCGGAG ATTCCTACCT TTCGGCTCTG
ATACAGGAAT TTGGTAACTC AGATTGGGTG AAACACGCAC TCAAATTTGA GTCACATGCG
AAAGACCAGT GCCCCCTGTG CCAGCAGTCG CTACCTCAGG ACTTTTACGG GGAAGTGCGC
AAGGTCTTTG ACGTGACCTA TGAGAAACGC CTGGCTGCAT TGAACGCCCT ACAGCAGAGG
TACCAAGGTG CTGTCGAACA GCTTCTCCGC CAGTGCAATG GGCCAACCTA TGAAATAGAG
GCGATCCAAA TCCATGCCGT AAATCTGCGG GCGCTTCTGC AAAGGAACCT TCAAATCTTA
GCGACGAAGG TTTCTAACCC TACAACTGCC GTATCTCTGG ACTCTAGCGC AGCCCTGCTC
AAGTCTTTGA ATGACTCTAT TGCCGTTGAG CAGCATAAGA TTGATGAGTT CAACGCCAAG
GTCAAGAACA AGCAAACACA CCTGGATAGC ATCAAAGACC GTTTTTGGGT TTGGCTAAAA
AATGCTTGCG AACCCCAGTT AGCGGCGTTC GAGACAGAAG ACCAGCAGCT ATCGAAAAAA
AGGCAGCAGG CCAAGGACGG CGTCGTGCAA ATGAGGGCTG AGATCGCCGT TCAGCGAAAT
TTAATTGCCG CATCGCGCGC CGCGACCACG AACGTAGATC AGTCCGTGGA AAGCATTAAC
CAATGGCTCA AGATCCTTGG GTTGAAAGGG TTCGAGTTGG TCAAGGAGGA GGGCGCGGTT
CCCCGATACC GCCTTCAGCG TGAGGCGGTG AACGATGGCG TGTTCAGGAC ACTGAGTGAA
GGGGAAAAAA CCCTGATTTC ATTCCTGTAC TTCCTGGAGG TGTGTAACGG TGAGCTGAAT
GCCCAAGGAG GTACGCTGAA AGGTGAGCGC ATTATCGTTA TTGACGACCC TATTTCGAGC
CTGTCACATA ACTACGTCTA CGACATTGCT TCCTTGATTC GCCGCCTGGT GCTGCACCCG
AGGACTCGTT TCAAGCAAGT AGTCATCCTG ACCCACAATT TGTTCTTCTT CCATGAGATG
CACAAGCTGT TAAAAGAGGA CAAGGAAGAC TCTCTGGCCC TTTTCCGCAT TTGCAAGGCC
CACTACAGCA CCGTGGTGCC TATGGGTGAA AACGAAATCC AGAATGATTA CCAAGCCTGC
TGGCACACAC TCAAGGACGC CTTGAATGGC TCAGCTTCAG CCAGCGTCAT TCCCAACGTC
ATGCGTAACA TCCTTGAGCA TTACTTCACC TTCGTACATC AGAAGGAGAG CTTGCGCAGG
GCATTAATGG AGCTCAGTGA CGAGAACCCT CAGTTCCGGG CCCTCTATAG GTATGTAAAC
CGAGAGTCCC ATGCCGACTC CATCAATTTA ACGGACTTCG GCGAAATTGA TCCACACGCG
TTCATACAAC GGTTCAGAGA GGTTTTCGTA AAAACCAATT TTGAGGCCCA TTTCGACAAA
ATGATGGCCT GA
|
|---|
| Protein sequence | MEKNFHEEAS QPGVFTLNEG NIEAEKAIAD AEAAINLLTG TLDAHMMAGK EAKAAQELAK
DKLKDSIWKH KTPFDNSPLA YCFNRLNTKE RVLEAVAQVA LAPTTDTPDA LRAEAAALHG
ASDAVLPAIP SIKFTGGEIE ADLILVEVIS GSGDSYLSAL IQEFGNSDWV KHALKFESHA
KDQCPLCQQS LPQDFYGEVR KVFDVTYEKR LAALNALQQR YQGAVEQLLR QCNGPTYEIE
AIQIHAVNLR ALLQRNLQIL ATKVSNPTTA VSLDSSAALL KSLNDSIAVE QHKIDEFNAK
VKNKQTHLDS IKDRFWVWLK NACEPQLAAF ETEDQQLSKK RQQAKDGVVQ MRAEIAVQRN
LIAASRAATT NVDQSVESIN QWLKILGLKG FELVKEEGAV PRYRLQREAV NDGVFRTLSE
GEKTLISFLY FLEVCNGELN AQGGTLKGER IIVIDDPISS LSHNYVYDIA SLIRRLVLHP
RTRFKQVVIL THNLFFFHEM HKLLKEDKED SLALFRICKA HYSTVVPMGE NEIQNDYQAC
WHTLKDALNG SASASVIPNV MRNILEHYFT FVHQKESLRR ALMELSDENP QFRALYRYVN
RESHADSINL TDFGEIDPHA FIQRFREVFV KTNFEAHFDK MMA
|
|---|
| |