Gene Psyr_2638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2638 
Symbol 
ID3368155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3205149 
End bp3206219 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content59% 
IMG OID637652986 
Producthypothetical protein 
Protein accessionYP_235715 
Protein GI66045874 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2021] Homoserine acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.12684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAGAC TCATTTCACG TCCCACGATC GGGCTGTTGT TTTCTATGGC CTTACTCGGC 
TCTGCCGTCA GTGCCGCGCC GTTACCCGCT GCGACCGAGG GCGACTGGGT TGCACCGCAG
TTCACCTTCC ATACCGGTGA AAAACTCGCC AACCTCAAAC TGCACTACAT CACCCTTGGC
AATCCCAAAA ATCCCGCCAT CCTCTTTCTG CACGGCACCT ATCGGCCAGG CAGCGATATG
CTGAGCAAGG ATTTTGGCGG GGAGCTGTTT GGCCCTGGTC AACCGCTGGA CGCCAGCAAG
TACTACATCA TTTCCACCGA TGGCATCGGC GTGGGCCAGT CCAGCAAACC ATCGGATGGC
TTGCGCACTC GGTTTCCGGC GTACAACTAC AACGACATGG TTAAAGCCCA GTATCGGTTG
GTCACCGAAG GTCTGGGTAT CAAGCACCTG AGGCTGATCA TCGGTAACTC CATGGGCGGC
ATGCAAACCT GGATGTGGGG CCAGAACTGG CCGCAGATGA TGGACGCATT GGTGCCCATG
GCGTCCCAAC CCACCGAAAT GTCATCCCGC AACTGGATGA TGCGCCGCTT GCTGGTCGAG
TCGATCAAGC AAGACCCGGC CTGGAACAAC GGCAACTACA GCGCGCAACC GCCGTCCCTA
CGCTTGGCCA ACGCGATGTT CAGCGTCGCT ACCAGTGGCG GTACCCTGGC GTATCAGGCG
ACTGCCCCGA CCCGCGCCCA AGCTGACAAG CTGGTGGATG AACGCCTCAG CGCTGCACAA
ACCGGCGACG CCAATGACTT CATCTACCAA TGGCAATCTT CCGCCGACTT CAACGCAGCC
CCCGGTCTGA AAAAAATCCA GGCGCCGGTG CTGGCCATCA ATTCGGCGGA CGATGAGCGC
ATCCCGCCGG AAACTGGCCT GATGGAGGCG TCGATGAAAG AGCTCAAGCA CGCACGGCTA
TTACTTATCC CCGCCAGCGC CGACACCCGT GGTCACGGCA CCACGAGCAT GGCGAAGTTC
TATAGCAAGG AACTCGGGCA GTTCATGCGC GAGACTGAAA AGGCGAAATA A
 
Protein sequence
MHRLISRPTI GLLFSMALLG SAVSAAPLPA ATEGDWVAPQ FTFHTGEKLA NLKLHYITLG 
NPKNPAILFL HGTYRPGSDM LSKDFGGELF GPGQPLDASK YYIISTDGIG VGQSSKPSDG
LRTRFPAYNY NDMVKAQYRL VTEGLGIKHL RLIIGNSMGG MQTWMWGQNW PQMMDALVPM
ASQPTEMSSR NWMMRRLLVE SIKQDPAWNN GNYSAQPPSL RLANAMFSVA TSGGTLAYQA
TAPTRAQADK LVDERLSAAQ TGDANDFIYQ WQSSADFNAA PGLKKIQAPV LAINSADDER
IPPETGLMEA SMKELKHARL LLIPASADTR GHGTTSMAKF YSKELGQFMR ETEKAK