Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2631 |
Symbol | |
ID | 3368148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3192044 |
End bp | 3194743 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652979 |
Product | hypothetical protein |
Protein accession | YP_235708 |
Protein GI | 66045867 |
COG category | [S] Function unknown |
COG ID | [COG4458] Uncharacterized protein conserved in bacteria, putative virulence factor |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.631713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACTC TGACCACCAG ACAGATACAA CTCGCCCATG CCTGGACATC CGTTCACACC GGTGCTGGCC TGGCCCTGGA CTGGGTCGCC GATGTGGCCG AAAAGGTCGA GGAAGTGGCC ATCAAGGCCG ACGCCCTCAG TCGTGACTTG CACCGTGCTC GCAACCTGTC CCGCAGCCTT GGTCGGGTCT CGACGACGCC CATGGGCATC GGCTTCTTCG GTTTGTCGCA GGCAGGCAAG AGCTACCTGA TTTCCGCCCT GGCGGCGGAC GAAAAAGGCC AGTTGCTGAC CCGGCTGGGT ACTCGGCAAC TGGACTTCAT CAAGCACGTG AACCCGGTGG GCGGCGGCAA GGAGGCGACC GGCCTGGTCA CGCGATTCAC GCGAACTGCT GCGCCAAGCC TGGACCCTCA GTTTCCGGTG GAGTTGCGTC TGTTTCGCGA GGTCGAGATC GCCATTATTC TGGCCAACGC CTGGTTTGAA GACTTCGATC ATCAGCGCCT GAACAGTCAA GTCACCGACG CGCAGATCGA TGCCCTTCTG CAGCGTTTCG ATGGGCAATC TGCAGCCGCT CCGACACCCG GCGTTAGCAG TGACGACGTT GTGCTGCTGT GGGATTACCT GGAGCACCAT TACGCCAACG CCATGCGCCC ATTGAACGCC CGTTATTGGC CTTGCGTGAT CAAACTGGCG CCGCGCCTGT CGGTGCGTGA ACGCGCTCAG TTGTTCGAGC CGCTGTGGGG CGGTATCGGC AAAATGACCG AAACCTATGA ACAACTGGCC TCCGCCCTGC ACCGCCTGGG GCTGGCAGAG ACAGTTTTTG CGCCGATCAG CGCGTTGGTC ACCGAGCGCG ACGGGCAACT GGTGCAAAGC AACAGCATCA TCAACGTCGA TATTCTCAGC CGTCTTGGCG GCAGCGCGGA TTCACCCATA GAGGTGCGTC CGGCCCATGA GGGCACCTTG CGCTCCGCCG TGTCGGTGAA CAGGGCCGAA CTGGCGGCGC TTACCAACGA GCTTATTTTT CGTCTGGACA ACGAGCCGGC CAACGCGATT GTCAACAGCG TCGATCTGCT CGACTTCCCG GGCTACCGCA GCCGCCAAAA GCTGATGAGC ATCAACGAGG CCAGCGAAGT CGACAGCAAT GGCACCGCCA ACAATCCGGT CGCCAGGCTG CTGCTGCGCG GCAAGGTCGC CTACCTTTTC GAACGTTACA CCAACGAGCA GGAAATGAAC GCGCTGGTGA TGTGCACCAG CACCTTCAAG CAGAGCGAAG TGGTGAGCGT CGGTCCGGTG CTCAAGAGCT GGATCGACAA GACCCAGGGC ACTAGTCCCC AGCAGCGCGA TGGCCGCGCC AGCGGGCTGA TCTGGGCGTT GACCATGTGT GACGGCTTTA TCGGCGGCGC GCTCAACGGC GAGACCGTGC AGTTTCCCGA AGGCTGCGAC AACATGCTCA AACTGACCAT GATCGAGCGA TTCGGCAACG AAGACTGGAT GAAGCAATGG GGCAGCACTC CATTCAAGAA CACCTATCTT GTGCGCAAGC CGCGCTTCAA GACCAGCTTC ATCGAGTTGG CGGCGGACGG TGAAGAACGC GCTTACAGCG ACTCATCGCA CACTGCGCTA CAGGCTCTGC AACAAGCGTT CAGCAACAGT GAGCTGGTCA AACGCCATGT GGCGGAGCCG CAGGAAGCCT GGCAAGCGAT GCTTACGCTG AACGACGGCG GCATGACCCG TTTCAGCTCG GCGTTCAGTC CGATCGCCAA CATCGACTTC AAGTTACAGC GTATTGCCGA GCAACTGGAC GAGTTGATGG TGCAATTACT GCCGCGCCTG GAGGAGTACT ACGAAGCCGG TGGCGAAGAC GAACGGGCCA AGAAGAAGGT CATCGCCAAC ATGATTGCCC GTCCGTTCGC GACGACGCCG CACGGTAAGC ATGTACTTGG CGAACTGCTC GGTTACATGG CGCTGCCAGA ACAGCAGTTG CGCGACCTTT ACCTGAACGG TGATTTCGGC AGCCCTGCCA GCGAAGCCAC TGCGGCGGTG CAAGCTGTCG GCAAGCCTGA AGTGGAATAC GACATATTCG GCGAGGCCAT CGCAGCCACT GCCACGGTTG AAACGCCCGC AGCAGCGGCC GTAGCGCCGC AATACCAGAG CCACGAACAC CGCTTCGCCC GAGCGGCATT CGACCTGTGG GCAACGCACC TGCGAAACCT CAGCCGGCGC CAGCACCTGC TGGACTTGCT GGAGTTGCCC GCTGAGGCCA TCGCCCTGCT GGTCAAGGAA CTGGTGGTCT GCGCCGAGCG CCTGGACTTG CCGTTGCAGC TCAGCAACGC GCTGCTCAAA CGTGCCCAGA GCGGTGTGCG CAGAGAAAAC CTGGTGCAGC GCCAGGTGCT GACCGCGCAA CTGCTGCTCA ACGACTTCGC CGCCTGGTTC GGGCACACCG CCCAGCCGGC GGGTCAACGG CCAACGGGCC TGCTGGGTGC CAAACAACCG TTGTTTGCCT TTTATCAAAA GGAAATGCCA GGTCGCTTCC CGCACCTCGC AGCGCAAGCC GACGACCAGA GCGTGATTTT CGCTGATGAC TGGATTTCTG GCATTGCCAT TCATACCCAG AAAAACGTCG GTCACCGCAA AGGCAAAGAA ATAACTCCTG AGCAAAACGA GGCCATGGGC CGCGTTATCC AGGCGTTCAA AGCGAGATAA
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Protein sequence | MTTLTTRQIQ LAHAWTSVHT GAGLALDWVA DVAEKVEEVA IKADALSRDL HRARNLSRSL GRVSTTPMGI GFFGLSQAGK SYLISALAAD EKGQLLTRLG TRQLDFIKHV NPVGGGKEAT GLVTRFTRTA APSLDPQFPV ELRLFREVEI AIILANAWFE DFDHQRLNSQ VTDAQIDALL QRFDGQSAAA PTPGVSSDDV VLLWDYLEHH YANAMRPLNA RYWPCVIKLA PRLSVRERAQ LFEPLWGGIG KMTETYEQLA SALHRLGLAE TVFAPISALV TERDGQLVQS NSIINVDILS RLGGSADSPI EVRPAHEGTL RSAVSVNRAE LAALTNELIF RLDNEPANAI VNSVDLLDFP GYRSRQKLMS INEASEVDSN GTANNPVARL LLRGKVAYLF ERYTNEQEMN ALVMCTSTFK QSEVVSVGPV LKSWIDKTQG TSPQQRDGRA SGLIWALTMC DGFIGGALNG ETVQFPEGCD NMLKLTMIER FGNEDWMKQW GSTPFKNTYL VRKPRFKTSF IELAADGEER AYSDSSHTAL QALQQAFSNS ELVKRHVAEP QEAWQAMLTL NDGGMTRFSS AFSPIANIDF KLQRIAEQLD ELMVQLLPRL EEYYEAGGED ERAKKKVIAN MIARPFATTP HGKHVLGELL GYMALPEQQL RDLYLNGDFG SPASEATAAV QAVGKPEVEY DIFGEAIAAT ATVETPAAAA VAPQYQSHEH RFARAAFDLW ATHLRNLSRR QHLLDLLELP AEAIALLVKE LVVCAERLDL PLQLSNALLK RAQSGVRREN LVQRQVLTAQ LLLNDFAAWF GHTAQPAGQR PTGLLGAKQP LFAFYQKEMP GRFPHLAAQA DDQSVIFADD WISGIAIHTQ KNVGHRKGKE ITPEQNEAMG RVIQAFKAR
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