Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2625 |
Symbol | |
ID | 3368142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3184816 |
End bp | 3185553 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637652973 |
Product | putative lipoprotein |
Protein accession | YP_235702 |
Protein GI | 66045861 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACATG TACGTCGTCA TCTGCCGAGG GCCATGTTGG GCCTGATCAT CTCCGTCAGT CTGGTGCTGG CCGGTTGCGC CAACAACGGC ACCGGCAGCA GCCTGCTCGG CTCAGGCACT GCCCCTGATC CACGTCTGAC CAAAAGTACC GATTCGTCAT TTTTCTCTAC TTCAGGCCTT ACCGCCTGCG CCGCTGCTGC AGGCGTAGGT ATTCTGGCCT GTGCCGTTGC GAGTCCCAGC GACAAGGTGA AATGCATGGT TGTGGCGGGT ATCGCTGCTT GCGGCGTCGC CATGGGGGCG AACTATTACT ATGACTACCG GCGCAGCAAG TACTCCGACA CCACCCAGCG CCTGCAGCTG ATGAGTGACG ATGTAAAAGC CGACACCGAA AAAGTTGCCC AGCGTACTTA CACGCTGCAG CAGGTCATCA ACGACGACAA AGAGCGCATC GCCGGTATTC AGAAATCCAT CAAAACCAAG ACACTGGACA AAGCCAAGGC TCAGCAAGAG ATCGCCAGTG TCGACAGCAA CCTGGCTCAG ATGAATAAAG ACCTGACCGG CATGCGCTCC AAAGTAGCTG AATACAAGAA GACCGCTGAC CTTGAGCGCG CCAATAGTGG CGGCACACAG GTCACTGCTA TCGACGGCGA GATCAGCAAA ATGAACAGCA AGGTCGCGTC TTTGCAAAAA GAAGTGGACG GCCTTTACAG CCAGCGCCAA GCCATCACAT TGGGTTGA
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Protein sequence | MEHVRRHLPR AMLGLIISVS LVLAGCANNG TGSSLLGSGT APDPRLTKST DSSFFSTSGL TACAAAAGVG ILACAVASPS DKVKCMVVAG IAACGVAMGA NYYYDYRRSK YSDTTQRLQL MSDDVKADTE KVAQRTYTLQ QVINDDKERI AGIQKSIKTK TLDKAKAQQE IASVDSNLAQ MNKDLTGMRS KVAEYKKTAD LERANSGGTQ VTAIDGEISK MNSKVASLQK EVDGLYSQRQ AITLG
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