Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2622 |
Symbol | |
ID | 3368139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3179878 |
End bp | 3182922 |
Gene Length | 3045 bp |
Protein Length | 1014 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652970 |
Product | acriflavin resistance protein |
Protein accession | YP_235699 |
Protein GI | 66045858 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATCT CCGCGCTGTC GATTCGTTAC CCGGTCCCGG CGGTCATGCT GTTTTTACTG CTGACCCTGT TTGGTTTCCT CGGGTTCGAG CGCCTCGGTA TTCAGGACTT TCCCGATACC GATCTGCCTG CAGTGGTCAT CAGTGCCTCG CTGGAAGGGG CCGCCCCCGA ACAACTGGAA ACCGAAGTCG CGCGCAAGCT CGAAGACAAG CTGACCTCGT TGCGCCTGCT CAAGCATGTC ACCACGCAAA TTACCGAAGG CAGCGTCCTC ATCAATGTCA TCTTCGACAT CGACAAGGAT GGCAACGAAG CCCTCAACGA AGTACGCAAT GCGGTGGACA GCGCTGCGGC TGAATTGCCC GCCAACCTCG ACACGCCATC GGTAACCCGC CTGACCACCA ATACCACGGC GTTGCTGACC TATGTGGTCG ATGCGCCACG GATGGACGAA GAAGCGTTGT CATGGTTTGT CGACAATGAG TTGAGCAAGC AGCTGCTGAC CGTACGTGGT GTCGCAAAGA TCAGCCGCGT GGGCGGTGTG GACCGCGAAG TCCAGGTTGA CCTTGATCCG GCGTTAATGG CCGGCCTGGG TCTGAGTGTG ACCGACATCG CGGATCGGTT GCGGGCGATG CAGAAAGACA ATTCCGGCGG CCAGGGCGAT CTGGGCAGCG GTCAACAGGC GCTGCGTGTC CTGGGCGGCA TTGACGACCC GGCGGCGCTG GGCGCCATCC GCATTCCCGT TAGCGATGGA CGAATGCTCG CAGTGCAGCA ACTGGCAACC GTGCGTGACA CCCATGCCGA GCGCAACACC CTGGCGTATC GCGACGGCAA ACCGGTGATT GGCTTTCAGG TCATCCGCTC CCTGGGTTTT TCCGACGTCG GCGTGACCAG GGATTTGCGT CAGGCAGTCA ATGAGTTCGC CATACAACAC CCTGATGTGC GTATCGAAGA GGCGAGTAAT GCCGTCGAGC CGGTGATGGA AAACTATCGT GGCTCTATGG CGCTGCTCTA CGAAGGGATG TTACTGGCGG TTTTGGTGGT CTGGTGGTTC CTGCGTGACT GGCGGGCGAC GATTATCGTG GCCACGGCAC TGCCTTTGTC GATCATACCG ACCTTCGGCG TGATGTATTT TGCCGGCTTT AGCCTCAATA CCGTTTCGCT GTTGGCGCTG GCGCTGGTAA TCGGCATTCT GGTCGACGAT GCCATTGTTG AGGTCGAAAA CATTGCGCGA CACCTGCGCA TGGGCAAAAC CCCGCGACAG GCCGCGATTG AGGCGTCCGA CGAGATCGGC CTTGCGGTAT TGGCAACCAC CGTGACCCTG GTCGCGGTAT TCCTGCCGAC CGCTTTCATG GGCGGGATTT CCGGCAAACT GTTTCGCCAG TTCGGTGTGA CGGCCAGCGC TGCGTTGATG TTTTCGTTGC TGGTCGCCCG TCTTCTGACG CCGATGATGG CGGCGTATTT ACTCAAGCCA CGTCCGCATG GCGAGCATGA CAGCGGTTTG ATGAGACGTT ATCTGGGCTG GATTCACACC AGCCTGAGCC GCCGCAAGAC CACCATGGCC ATTGTTGGTG CTTTGTTTAT CGGCTCGCTG GCGCTGATCC CGTTGCTGCC GACCAGCTTT CTGCCTGCCC AGGACATTGC CAGCAGCACC GTCAGCCTGG AACTGCCGCC CGGCAGCAGT CTGGCTCAGA CCGGTGAGGT TGCCTTGCAG GCTGAAAAGC GTTTACGCGC GATTCCTGAA GTGGCCCACG TGTTCATCGC GGCCGGCAGC GGCGAAACGG GCGGTGCAGG TGATCGCGAT GCGAAACTGA CCGTCGATTT GCTGCCGCGT GACCAGCGCG CACTGAAACA ATCCCAGGTG GAAGCGAGCA TGCGTGAAAG TCTGCGCAGC TTGCCTGGTG TGCGGGTGAC GGTCGGCGGT GACGCCAGCG GCGAACGGCT GGACATCGTC CTTGCCAGCG ATGATGGCGA TTTGCTGGAG CGGACTGCCG CCGCGCTTGA ACCGCAGTTA CGCCAGATAA AAGGCATCGG CAACGTCACC TCAAGTGCTG CGGTACAACG GCCGGAAATC CAGATGCGCC CGGATGTTGT CCGCGCGGCA GAGCAGGGCA TCAGTAGCCA GGACATCGCC GACACTCTGC GCATGGCCAC CTATGGCGAA TACAGCTCGT CCCTGGGCAA GATCAATCTG TCCCAGCGCC AGGTCAATGT GCGGGTGCGC ATGCAGCCGC AAGTGCGCAC CGATCTGCAA AGCCTCGGTC AGTTAAGGGT CACCGGGCGT GATGGCCAGA TAGCACTGGC GTCGCTGGGC GAGCTCAGCA TGGGCAGCGG CCCCGCGCAG ATTGATCGTA TCGATCGCTT GCGCAATATC ACGCTGTCCA TCGAACTCAA TGGCAGCAAC CTGGGCGAAG TGATGGAGCA GGCCAGGCAG TTGCCGGTCA TGCAGAACCT GCCAGCGCAA GTAAAACTGG TGGAGCAGGG CGAGTTGCAG TTGATGAGCG AGTTGTTTGG CAACTTCAGC CTGGCGATGG CCGTCGGCGT GTTCTGTATA TACGCGGTAC TGGTGCTGTT GTTCCATGAC TTTATGCAGC CGCTGACAAT CCTCTCGGCG CTGCCTCTAT CGTTGGGCGG CGCACTGTTG GCACTGTTGA TCGGCGGGAT GAGTTTTTCC ATGGCGTCGG TCATCGGTTT GCTGATGCTG ATGGGGATCG TGACCAAGAA CTCGATCCTG CTGGTGGAAT ACGCAATCAT GGCCCGCCGT GCACCGACCG TGAGCCGCTA TGACGCGTTG ATCGACGCCT GCCACAAACG CGCCCGGCCG ATCCTGATGA CCACCATCGC AATGGGCGCG GGCATGTTGC CGACCGCACT GGGATGGGGT GGCGAATCAG GCTTCCGCCA GCCGATGGCG GTGGTCGTCA TCGGCGGACT ATTGGCCTCG ACCGTACTAA GCCTGTTGGT AGTGCCCGTT ATCTTTACTT ATGTCGATGA TGGTCATGAG GCATTCAAAA GATGGTTTAG CAGGCCTCGC CAGACTCAAG ATTAG
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Protein sequence | MNISALSIRY PVPAVMLFLL LTLFGFLGFE RLGIQDFPDT DLPAVVISAS LEGAAPEQLE TEVARKLEDK LTSLRLLKHV TTQITEGSVL INVIFDIDKD GNEALNEVRN AVDSAAAELP ANLDTPSVTR LTTNTTALLT YVVDAPRMDE EALSWFVDNE LSKQLLTVRG VAKISRVGGV DREVQVDLDP ALMAGLGLSV TDIADRLRAM QKDNSGGQGD LGSGQQALRV LGGIDDPAAL GAIRIPVSDG RMLAVQQLAT VRDTHAERNT LAYRDGKPVI GFQVIRSLGF SDVGVTRDLR QAVNEFAIQH PDVRIEEASN AVEPVMENYR GSMALLYEGM LLAVLVVWWF LRDWRATIIV ATALPLSIIP TFGVMYFAGF SLNTVSLLAL ALVIGILVDD AIVEVENIAR HLRMGKTPRQ AAIEASDEIG LAVLATTVTL VAVFLPTAFM GGISGKLFRQ FGVTASAALM FSLLVARLLT PMMAAYLLKP RPHGEHDSGL MRRYLGWIHT SLSRRKTTMA IVGALFIGSL ALIPLLPTSF LPAQDIASST VSLELPPGSS LAQTGEVALQ AEKRLRAIPE VAHVFIAAGS GETGGAGDRD AKLTVDLLPR DQRALKQSQV EASMRESLRS LPGVRVTVGG DASGERLDIV LASDDGDLLE RTAAALEPQL RQIKGIGNVT SSAAVQRPEI QMRPDVVRAA EQGISSQDIA DTLRMATYGE YSSSLGKINL SQRQVNVRVR MQPQVRTDLQ SLGQLRVTGR DGQIALASLG ELSMGSGPAQ IDRIDRLRNI TLSIELNGSN LGEVMEQARQ LPVMQNLPAQ VKLVEQGELQ LMSELFGNFS LAMAVGVFCI YAVLVLLFHD FMQPLTILSA LPLSLGGALL ALLIGGMSFS MASVIGLLML MGIVTKNSIL LVEYAIMARR APTVSRYDAL IDACHKRARP ILMTTIAMGA GMLPTALGWG GESGFRQPMA VVVIGGLLAS TVLSLLVVPV IFTYVDDGHE AFKRWFSRPR QTQD
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