Gene Psyr_2622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2622 
Symbol 
ID3368139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3179878 
End bp3182922 
Gene Length3045 bp 
Protein Length1014 aa 
Translation table11 
GC content60% 
IMG OID637652970 
Productacriflavin resistance protein 
Protein accessionYP_235699 
Protein GI66045858 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCT CCGCGCTGTC GATTCGTTAC CCGGTCCCGG CGGTCATGCT GTTTTTACTG 
CTGACCCTGT TTGGTTTCCT CGGGTTCGAG CGCCTCGGTA TTCAGGACTT TCCCGATACC
GATCTGCCTG CAGTGGTCAT CAGTGCCTCG CTGGAAGGGG CCGCCCCCGA ACAACTGGAA
ACCGAAGTCG CGCGCAAGCT CGAAGACAAG CTGACCTCGT TGCGCCTGCT CAAGCATGTC
ACCACGCAAA TTACCGAAGG CAGCGTCCTC ATCAATGTCA TCTTCGACAT CGACAAGGAT
GGCAACGAAG CCCTCAACGA AGTACGCAAT GCGGTGGACA GCGCTGCGGC TGAATTGCCC
GCCAACCTCG ACACGCCATC GGTAACCCGC CTGACCACCA ATACCACGGC GTTGCTGACC
TATGTGGTCG ATGCGCCACG GATGGACGAA GAAGCGTTGT CATGGTTTGT CGACAATGAG
TTGAGCAAGC AGCTGCTGAC CGTACGTGGT GTCGCAAAGA TCAGCCGCGT GGGCGGTGTG
GACCGCGAAG TCCAGGTTGA CCTTGATCCG GCGTTAATGG CCGGCCTGGG TCTGAGTGTG
ACCGACATCG CGGATCGGTT GCGGGCGATG CAGAAAGACA ATTCCGGCGG CCAGGGCGAT
CTGGGCAGCG GTCAACAGGC GCTGCGTGTC CTGGGCGGCA TTGACGACCC GGCGGCGCTG
GGCGCCATCC GCATTCCCGT TAGCGATGGA CGAATGCTCG CAGTGCAGCA ACTGGCAACC
GTGCGTGACA CCCATGCCGA GCGCAACACC CTGGCGTATC GCGACGGCAA ACCGGTGATT
GGCTTTCAGG TCATCCGCTC CCTGGGTTTT TCCGACGTCG GCGTGACCAG GGATTTGCGT
CAGGCAGTCA ATGAGTTCGC CATACAACAC CCTGATGTGC GTATCGAAGA GGCGAGTAAT
GCCGTCGAGC CGGTGATGGA AAACTATCGT GGCTCTATGG CGCTGCTCTA CGAAGGGATG
TTACTGGCGG TTTTGGTGGT CTGGTGGTTC CTGCGTGACT GGCGGGCGAC GATTATCGTG
GCCACGGCAC TGCCTTTGTC GATCATACCG ACCTTCGGCG TGATGTATTT TGCCGGCTTT
AGCCTCAATA CCGTTTCGCT GTTGGCGCTG GCGCTGGTAA TCGGCATTCT GGTCGACGAT
GCCATTGTTG AGGTCGAAAA CATTGCGCGA CACCTGCGCA TGGGCAAAAC CCCGCGACAG
GCCGCGATTG AGGCGTCCGA CGAGATCGGC CTTGCGGTAT TGGCAACCAC CGTGACCCTG
GTCGCGGTAT TCCTGCCGAC CGCTTTCATG GGCGGGATTT CCGGCAAACT GTTTCGCCAG
TTCGGTGTGA CGGCCAGCGC TGCGTTGATG TTTTCGTTGC TGGTCGCCCG TCTTCTGACG
CCGATGATGG CGGCGTATTT ACTCAAGCCA CGTCCGCATG GCGAGCATGA CAGCGGTTTG
ATGAGACGTT ATCTGGGCTG GATTCACACC AGCCTGAGCC GCCGCAAGAC CACCATGGCC
ATTGTTGGTG CTTTGTTTAT CGGCTCGCTG GCGCTGATCC CGTTGCTGCC GACCAGCTTT
CTGCCTGCCC AGGACATTGC CAGCAGCACC GTCAGCCTGG AACTGCCGCC CGGCAGCAGT
CTGGCTCAGA CCGGTGAGGT TGCCTTGCAG GCTGAAAAGC GTTTACGCGC GATTCCTGAA
GTGGCCCACG TGTTCATCGC GGCCGGCAGC GGCGAAACGG GCGGTGCAGG TGATCGCGAT
GCGAAACTGA CCGTCGATTT GCTGCCGCGT GACCAGCGCG CACTGAAACA ATCCCAGGTG
GAAGCGAGCA TGCGTGAAAG TCTGCGCAGC TTGCCTGGTG TGCGGGTGAC GGTCGGCGGT
GACGCCAGCG GCGAACGGCT GGACATCGTC CTTGCCAGCG ATGATGGCGA TTTGCTGGAG
CGGACTGCCG CCGCGCTTGA ACCGCAGTTA CGCCAGATAA AAGGCATCGG CAACGTCACC
TCAAGTGCTG CGGTACAACG GCCGGAAATC CAGATGCGCC CGGATGTTGT CCGCGCGGCA
GAGCAGGGCA TCAGTAGCCA GGACATCGCC GACACTCTGC GCATGGCCAC CTATGGCGAA
TACAGCTCGT CCCTGGGCAA GATCAATCTG TCCCAGCGCC AGGTCAATGT GCGGGTGCGC
ATGCAGCCGC AAGTGCGCAC CGATCTGCAA AGCCTCGGTC AGTTAAGGGT CACCGGGCGT
GATGGCCAGA TAGCACTGGC GTCGCTGGGC GAGCTCAGCA TGGGCAGCGG CCCCGCGCAG
ATTGATCGTA TCGATCGCTT GCGCAATATC ACGCTGTCCA TCGAACTCAA TGGCAGCAAC
CTGGGCGAAG TGATGGAGCA GGCCAGGCAG TTGCCGGTCA TGCAGAACCT GCCAGCGCAA
GTAAAACTGG TGGAGCAGGG CGAGTTGCAG TTGATGAGCG AGTTGTTTGG CAACTTCAGC
CTGGCGATGG CCGTCGGCGT GTTCTGTATA TACGCGGTAC TGGTGCTGTT GTTCCATGAC
TTTATGCAGC CGCTGACAAT CCTCTCGGCG CTGCCTCTAT CGTTGGGCGG CGCACTGTTG
GCACTGTTGA TCGGCGGGAT GAGTTTTTCC ATGGCGTCGG TCATCGGTTT GCTGATGCTG
ATGGGGATCG TGACCAAGAA CTCGATCCTG CTGGTGGAAT ACGCAATCAT GGCCCGCCGT
GCACCGACCG TGAGCCGCTA TGACGCGTTG ATCGACGCCT GCCACAAACG CGCCCGGCCG
ATCCTGATGA CCACCATCGC AATGGGCGCG GGCATGTTGC CGACCGCACT GGGATGGGGT
GGCGAATCAG GCTTCCGCCA GCCGATGGCG GTGGTCGTCA TCGGCGGACT ATTGGCCTCG
ACCGTACTAA GCCTGTTGGT AGTGCCCGTT ATCTTTACTT ATGTCGATGA TGGTCATGAG
GCATTCAAAA GATGGTTTAG CAGGCCTCGC CAGACTCAAG ATTAG
 
Protein sequence
MNISALSIRY PVPAVMLFLL LTLFGFLGFE RLGIQDFPDT DLPAVVISAS LEGAAPEQLE 
TEVARKLEDK LTSLRLLKHV TTQITEGSVL INVIFDIDKD GNEALNEVRN AVDSAAAELP
ANLDTPSVTR LTTNTTALLT YVVDAPRMDE EALSWFVDNE LSKQLLTVRG VAKISRVGGV
DREVQVDLDP ALMAGLGLSV TDIADRLRAM QKDNSGGQGD LGSGQQALRV LGGIDDPAAL
GAIRIPVSDG RMLAVQQLAT VRDTHAERNT LAYRDGKPVI GFQVIRSLGF SDVGVTRDLR
QAVNEFAIQH PDVRIEEASN AVEPVMENYR GSMALLYEGM LLAVLVVWWF LRDWRATIIV
ATALPLSIIP TFGVMYFAGF SLNTVSLLAL ALVIGILVDD AIVEVENIAR HLRMGKTPRQ
AAIEASDEIG LAVLATTVTL VAVFLPTAFM GGISGKLFRQ FGVTASAALM FSLLVARLLT
PMMAAYLLKP RPHGEHDSGL MRRYLGWIHT SLSRRKTTMA IVGALFIGSL ALIPLLPTSF
LPAQDIASST VSLELPPGSS LAQTGEVALQ AEKRLRAIPE VAHVFIAAGS GETGGAGDRD
AKLTVDLLPR DQRALKQSQV EASMRESLRS LPGVRVTVGG DASGERLDIV LASDDGDLLE
RTAAALEPQL RQIKGIGNVT SSAAVQRPEI QMRPDVVRAA EQGISSQDIA DTLRMATYGE
YSSSLGKINL SQRQVNVRVR MQPQVRTDLQ SLGQLRVTGR DGQIALASLG ELSMGSGPAQ
IDRIDRLRNI TLSIELNGSN LGEVMEQARQ LPVMQNLPAQ VKLVEQGELQ LMSELFGNFS
LAMAVGVFCI YAVLVLLFHD FMQPLTILSA LPLSLGGALL ALLIGGMSFS MASVIGLLML
MGIVTKNSIL LVEYAIMARR APTVSRYDAL IDACHKRARP ILMTTIAMGA GMLPTALGWG
GESGFRQPMA VVVIGGLLAS TVLSLLVVPV IFTYVDDGHE AFKRWFSRPR QTQD