Gene Psyr_2609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2609 
Symbol 
ID3368126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3091468 
End bp3092679 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content60% 
IMG OID637652957 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_235686 
Protein GI66045845 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.194987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTT CCTCCGATGC AGCGATGCGT CTGTGCGAGA CGGTGAGGAT GCTCAGGCAC 
CTTGCCCTCA ATTTGCCCGA TCCGGTGTGC CTGAGCTTTC TCGCCCGGGA CGACGGCCCT
CTGCCAGAGC CGGCGTGCTC CAGCGTGCGA GCCACAGAGC GGGCGATCAA TGCCGCGTTT
GCGCGCATCG GCGTGCGCAC CCTGCAGTAC TTGCACGGTG GCGAGGCACA ACTGTCGTCG
TTCGAATATT TTATAAGCCG CAAAATCTGC GAAGCGCTCG ACTATAGCTA CGAGCACTTC
GACGATGCCG GAGACGTGAC CGCATTCAAT CGACTGCTCA AGCATTTTGA ATTCGACGGT
GCAGTGCCGC ATATAGAGAC ACTGCTCCTG ACCACCCACG ACCATGCCCG GTTGCTAGTA
CATGCCAGTG CCAACCGCGA GCTGCCTCCC GTGGTTTTGG CACTGCCCTG CGGCATTCCG
TTCGATCTCT GCCGCAACTG GTTCGACGCC TTGAGCGAGC GCTTTTTTGT CGTGACCTGG
GAAACCCGAG GGCTGTTCGG TGCCTGCGAG GCGTTCGACC AGATCGCGGT GGACACCGAT
GCCCAGGTTG CCGACATGAT CAGCGTGATG AATCACTTCG GGTTATCGAC CGCACATCTA
ATGGGCATCT GCGGCGGCGC GGTCATCGCC CTGAGCGCCG CTGCTGCCCA CGCCGAGCGG
GTCAACTCCC TGAGCCTGTG GCATGGGGAT TACAATCTGG GCGACAGTGA CTTGCGCACC
GCTCATCAGC AAAACTTCGA GTGGCTGATG GAAAGCGCTG CTCAGGATCG CGACGAGGCT
GCCGACCTGC AAGCGATGTT CCTCGATCAG GCAACGCTGG CCACCACCCC TGAGTCCATT
GCCCACGTAG TGCTTTACCC CTACGTCAAT CCCGAGTTGT TCTATCGCTA TGCGCGTTTG
AATGACGCGC TGAACAAGAC CGAGCTGGCA CCACGACTGA CGCGCATCAC CGCGCCAACC
CTGGTAGTGG CTGGCGATGC CGACTCGACT ACGCACATCG GCGGCTCACG GCATATCGCC
GCGTCGATCA AGGACGCCAC GCTGCACGTA GAGCGCAATG GCAGCCACCT GGCGTTCTTT
GCCTCCAGCC AGCAATCGAA ACAAACCGCC TTCAGCTTCC TCGAAGAAGT TCTTCAGCCC
GCTGTCGCCT GA
 
Protein sequence
MTISSDAAMR LCETVRMLRH LALNLPDPVC LSFLARDDGP LPEPACSSVR ATERAINAAF 
ARIGVRTLQY LHGGEAQLSS FEYFISRKIC EALDYSYEHF DDAGDVTAFN RLLKHFEFDG
AVPHIETLLL TTHDHARLLV HASANRELPP VVLALPCGIP FDLCRNWFDA LSERFFVVTW
ETRGLFGACE AFDQIAVDTD AQVADMISVM NHFGLSTAHL MGICGGAVIA LSAAAAHAER
VNSLSLWHGD YNLGDSDLRT AHQQNFEWLM ESAAQDRDEA ADLQAMFLDQ ATLATTPESI
AHVVLYPYVN PELFYRYARL NDALNKTELA PRLTRITAPT LVVAGDADST THIGGSRHIA
ASIKDATLHV ERNGSHLAFF ASSQQSKQTA FSFLEEVLQP AVA