| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2598 |
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| Symbol | |
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| ID | 3368115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3045628 |
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| End bp | 3051465 |
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| Gene Length | 5838 bp |
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| Protein Length | 1945 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637652946 |
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| Product | putative DNA helicase |
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| Protein accession | YP_235675 |
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| Protein GI | 66045834 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0444969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA AGATTGAGGC GCTGATCGCC CGGAAGATCG GTTTCGCCTC CCACCAGAAC
GCCGTACCGC TGGTACGTGA ATTGAGTATC TGGAACCAGG AAGAAACCGG TTTTGAAAAC
CTGACCCTGA CCTTAAGCAC CGACCCGGAT TTCGTAGAGA GCCGCACTTG GCGTATAGAC
CGCATTCATG CCGGTGATCG CCTCAGCATT TCCGAGCGTG ATATCAAGCC TAACGCAGGT
TATTTGTCCG GGCTGACTGA AAGCCTCAGC GCTGACGTGG TGATGCGCCT TTCTCAGGGC
GACAACGTAC TCGTCGAGCA GCGCTTCCCG ACAGAACTGC TGGCGCGCAC AGAATGGGGC
GGCTTGAGCG CCATGCCGGA GCTGCTTGCG GCTTTCTGCA TGCCCAATGA TCCCGCGGTG
GATCGCGTAC TCAAAGCGGC CTCACAGGTT TTGCGGCGCG CGGGCAAGAA AGATGGCATT
GACGGCTATG AGAGCAAGTC GCGCACACGA ACCTGGGAGC TTGCCTCTGC CATTTGGTCC
GCAGTGTGCA GCTTTCAGTT GAGCTATGCA TTGCCCCCGG CCAGCTTTGA GCAACAGGGC
CAGAAGGTCC GGCCTCCGAG TGTGGTTCTG GAAAACGGCG TAGCGACCTG TCTGGACACT
GCATTGCTGT TTGCGGCGGC GTTGGAGCAG GCAGGCTTGA ATGCCCTGCT TATCATGACC
AAGGGGCACG CATTCGCAGG CGTCTGGTTG CAGCCTCAAG AGTTTTCCCA ATTGTTGACC
GATGAGGCGT CGGCAGTACG CAAACGCCTG GATCTGAAGG AGATGGTGGT ATTCGAAACC
ACCCTTTCTA CACAAACACC TGCGCCGGGC TTTTCCCAGG CGATTACAGC CGCCGAGCGT
CAGCTCGATG ATGAGCAGTT CATCATGGCC ATCGATTTGC ACCGTGCCCG GATGCAGAAG
ATTCGTCCGA TGGCGCTCGT CTCAGTCACC GAGGGATCGG ATGAGACAGC CGATGCTCCA
CCCACTATTG AAGGGCTGGA GGAGGCTCCG GCGCTTCCGG GGTTCGATGT CGAAATTAAT
ACTGACAGCG AAGGTCCGGC CGGCAAACTG ACGCTGTGGC AACGTAAACT CCTCGATCTG
ACGACTCGCA ATCGTCTCCT GCATCTTCCG GACAGCGCAA AGGGCGTGCG ACTGATATGC
CCGGATCCGG CAGTGCTTGA AGATCTGCTT TCCAGTGGCC AGCGCATTCG CATCGTGTCA
GTACCTGACT TGAAAAGCAG TGGCCGGGAT GTAGCCCTGT ACGAGCAGCA GAATAATGAA
AATCTGGTCG ACGAAGTTGC TCGTCAGGCT CTGGCTCGCG GCGAAGTGCT CGCTACTCTG
GAAAAGGTAA AACTTGAAGC AACCCTGATC GATCTGTTCC GCAAGGCGCG TAGCGATCTG
GAAGAGGGCG GTGCAAACAC GCTGTTTCTG GCCATCGGCT TTCTCAAGTG GAAGAAGAGT
GCCGACGACC CGAAAACCTA CTCCGCACCC CTGATTTTGC TGCCGGTAAA ACTTGAACGT
AAAAGTGCCT TGTCCGGGGT GACGCTCAGT CTTCTTGATG AAGAACCGCG TTTCAACCTT
ACGCTGCTTG AATTGCTGCG GCACGATTTC GAGTTGCTGA TTCCCGGGCT GGATGGCGAA
CTACCCAGTG ATGAAAGCGG CATTGATGTG ACTGGCATCT GGAACATGGT GCGGCGAGCA
GTGCGTGACG TGCCAGGATT CGAGGTGAGC ACCGAACTCG TTCTTGGCAC CTTCTCATTT
GCCAAATACC TGATGTGGAA AGACCTGAAT GCCAACGCAG CACAGCTGCT GCAAAGCCCT
TTGGTCAAGC ATTTGCTGGC CCCCTCTGAG GGAGATGAGG GCTTCTCCGG CTCAGACGAG
TTTCCAAGAC CAGAGCAGCT GGACTCGTCA GTAACGCCCG CCATGCTTTT CGCTCCGTTG
CCCGCCGACT CCTCGCAGTT ATCTGCCGTG GTGGCATCTG CCGGTACTCA CAGCTTTGTC
ATGGACGGGC CACCGGGAAC CGGCAAGTCG CAAACCATTG CCAACATGAT TGCCCACAAT
CTGGCCTTGG GTCGTCGCGT ACTGTTCGTG GCAGAGAAGC GCGCAGCCCT GGACGTGGTT
TACCGTCGCC TGGCAGAGAA GGGGCTTGGC GAGTTTTGCC TGGAGCTGCA TTCAAGCAAG
GCGTCCAAAG TTGAAGTGCT GAAGCAGTTG GACCGCGCCT GGGACGTCAG CGACGCATTG
AGCGCCGAGG AATGGGAGCG TGAAGCCACT CGTTTGCAGA CGCTGCGTTC GCGACTCAAC
GAACTGGTCG AGGTACTGCA CCGACGCTGG AGCAACGGGC TCTCCCTACA TCAGGCGATT
GGTCGTGTGG TGCGTGATCA TGGCCCTCAA ACACCCAGGC TGAGCTGGCC ATCAGGCACG
CAACATGATG CTGACGAGTA CAGCCAGTTG CTGGATCTGT CGCGTCGGTT AGGCTTGAAC
GGTGATGCCG CACGTAATCT GTCAGGCAAA TTCGGCGCCT TGGCGCAGAC CCAGTGGTCG
AACGCCTGGC AGGCACACAT TGCGAATGCC GCACGTGAGC TGCCGCAGGC CCTTGACGCG
TTGAATGCGG CGAGTGAAAA GCTTCTTGGC CTGACGCACC TGAACTTGCC TGTAGCTGAA
GTGGCGCAGG TTCAGCATCT TGATGAACTG GCGACTCTGG TCGTGGAGTC CTATGGACTG
AACCTCTCAT TTGCTTTTGC ACCCGATGCC GTCGCGCGTA TCGCAGCAGC CCGGCGCGCG
TGCCAGTTAA TCGAAAGCTA TCGAGAGCTT GAGGAAGGTC TGTCGCTGGA TTATGCAGAC
GAAGCCTGTC GTCGCATTCC CGTTGAGGCG ATGCGCAGCG AATGGCGAGA TGCCGAAGGA
AAGTTCTGGT TCCTGGCGAC TTTCGCCAAG AAAAAGGTCG CGAAGAAACT GGCCTCTTCA
GGTGGCGCAG CAGGTCTGCC GGACACGCTT GGCGACCTGG CGATTTTCGA ACGCCTGCAC
GCGCAACTGA ACGAACTGGA TACATTGGCC GGTGGTCTGC AGTCGATCCC GGGCTGGCAG
GGCCTGAGCA GTGACGTGTC ACAGATATTT CGTGCAGCCT CGTTGGCCGA AAACCTGCGC
GGGCTGATGA GCGGCCTGGC CGAATCACCG GACCACCTCG TTTCATTGCG CAGCGCCGTC
GCACGCCTGG TCGTTGAGGC CAATGAAATG TTGGCGCCGG GCGGGCAAAT CGGCGTCGCG
TTATCAGCCT TGCAACAGGC TTTGTCTCGC TACGAAGACG CCGCTCGACT GTTTGCTGAA
TTGTCTGCAG TCGGTCCAGA TACACAATCG AGCGTTGGCG CGTTGCGAGC TACTTCGCTG
TCGATCCAGC AACAGGAGGA GCAACTCAAG GCATGGTGCG ATTGGTGCCG GGTTCGCGAG
CAGGCAGGTG AGGCTGGTTT GGCAAGTCTG GCCCGTGCTG TCGAGGCAGG GAGTCTGTCA
CCTGCCGCAA GCGAGGAAAC CTTCATTACG GCCTATGCCC ATTGGTTCGC CACGCAAGGC
ATAGACGATG AACCGCTGTT GAGGAATTTC GTGGCTGCCG AACACATGAG CGACATCGGC
GCTTTCGTTC GCCTGGACGA CGAAATGGCG AAGCTGACAG TGCGTTATAT CCGGGCGAAA
CTCTGTGGCC TGATCCCCTC CAAAAATGAC ATACCCAAGA GCAGCGGCTT TGCCATTCTC
AAGCATGAAT TGCAGAAGTC CCGCCGGCAC AAACCTGTCA GGCAACTGGC TGTTGAAATG
GGCGACGCGC TGAATCGTCT GGCGCCCTGC ATGCTGATGA GCCCGCTGTC GATTGCGCAG
TTCCTGCCCG CTGATCAACC GCCATTCGAT CTGGTCATTT TCGACGAGGC TTCGCAGATC
GCTCCGTGGG ACGCGATCGG TTCGATAGCT CGAGGCAGGC AAGTCGTTAT CGCAGGAGAC
CCGCGTCAAA TGCCGCCGAC GAACTTTTTC AACCGTGGCC CGAATGCCAG CGACGACGAT
ACCGCTGAAG ACATGGAAAG TATTCTGGAC GAGTGCCTGG GAGCAGGGGT GCCAAGTCAC
AGTCTGAGCT GGCACTACCG GAGTCGCCAC GAAAGCCTGA TTGCCTTCTC CAATCACCGT
TACTACGACA GTAATCTCAT CACCTTCCCG GCAGCAGAGA CCCGCGCAAG TGCTGTGGAG
TGGCGCCGGG TTGAAGGTGT TTATGCAAAG GGCAAAGGGC GCTACAACCA GGCTGAAGCC
GAAGCCATTG TCAGCGAGAC AGTCAAGCGC CTTACCGATC CCGCGTTCGT GGCTGCTGGC
CACTCGATCG GTATCATCAC GCTCAACGCT GACCAGCAAA AACTGATCAA TGACCTGTTG
GACAACGCCC GCAAGCAATA CCCGCAGATC GAGCCGTTTT TTCAGGACAC TCAGACCGAG
CCGGTGGTCG TCAAGAATCT GGAAACAGTC CAGGGTGATG AGCGCGATCT GATCATGCTC
GGGATAGGCT ATGGCCCGAC CGAGCCGGGT GCGCAGGTCA TGTCCATGAA CTTTGGCCCC
CTCAACAAGG ACGGCGGCTG GCGCAGACTG AACGTCGCCA TCACACGGTC TCGCCGGGAA
ATGCTGGTGT TCTCATCCTT TGACCCGTCA ATGATCGACC TGAACCGGAC CAATGCCCGT
GCAGTCCGTG ATCTGAAGCA TTTCATAGAA TTCGCCCAGC GCGGACCAAA AGCCCTGGCC
GAGGCGGTAC AGGGCTCGGT CGGTGGTTAT GACTCGCCGT TCGAGGAAGC AGTCGCTCAA
GGGCTACGGC GCCTCGGTTG GCAAGTGATT CCGCAGATCG GAGTCTCTCG TTTCCGCATT
GATCTGGGAG TTGTCCATCC GGATCGTCCG GGTGACTATC TGGCCGGCGT CGAATGCGAT
GGCGCTACCT ATCACAGCGC CGCCACTGCC CGGGATCGGG ACAAGGTCCG CGGAGCAATT
CTCAGTGGCC TCGGCTGGAG TCTGGTGCGG CTATGGTCCA CGGAATGGTG GGTGGACAAG
GAAGGGGCAT TGCAGAGGCT GAACGCAGCG TTGAACGATC TTTTGGCGCA ATCCCGGGCA
GAAACAGAGG ACCATCGGAT AACAGAGCCG CCAACGGCCG AGCCTGTCGT CATAGACTTT
TCTAACGGTC CCCGCATCAG TGGCGAGTCA TCTGAAGAAC TGGCTGCCCC AATCAGTGAG
TTGTCGGCGG AGACGGGTGA GATTCGCATA GCGCGGTCTC ATGGCCTTCC ACCTGAGGCA
GGGGGGCAGA AGGGCATCTA TCGCATAGCC GACCTTTCTG CCCTTGCGCC ATTGATCCAG
GCCGACCAGT TTCACCTGCC TGGTTACACG CCGGTACTTC GCCAGCTCAT TGAAGAGGTG
CTGCGCCAGG AAGCGCCGAT TCTCGATGCA GTTTTAGTCC AGCGCATTGC GCGTGTACAT
GGTTTCCAAC GGTCGGGGCG GCTTATCAGA GACCGCGTGC TGGAGTTGGC GGAACAGCAC
CATTATGTCC AGCAAGCGGG GTTTGACGAG GTATTCGTCT GGCACGCGGA GGGCGACGTG
GCCGGATGGA CGACGTACCG GATTCCGGCC TCAAGCGAGG ACACACGAGC CATAGAAGAG
GTTGCTGCTG AAGAATTAAG CATTGCAGCG GCGAATGTCG ATGCCGAAGA CAAGGCCCTG
GAGGTTGCTC GACTGTTCGG TATAAAGCGC CTCACAGGAC CTGCGCGTGA ACGGATGGAG
CGAATCTTCA GTGCATAA
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| Protein sequence | MNIKIEALIA RKIGFASHQN AVPLVRELSI WNQEETGFEN LTLTLSTDPD FVESRTWRID
RIHAGDRLSI SERDIKPNAG YLSGLTESLS ADVVMRLSQG DNVLVEQRFP TELLARTEWG
GLSAMPELLA AFCMPNDPAV DRVLKAASQV LRRAGKKDGI DGYESKSRTR TWELASAIWS
AVCSFQLSYA LPPASFEQQG QKVRPPSVVL ENGVATCLDT ALLFAAALEQ AGLNALLIMT
KGHAFAGVWL QPQEFSQLLT DEASAVRKRL DLKEMVVFET TLSTQTPAPG FSQAITAAER
QLDDEQFIMA IDLHRARMQK IRPMALVSVT EGSDETADAP PTIEGLEEAP ALPGFDVEIN
TDSEGPAGKL TLWQRKLLDL TTRNRLLHLP DSAKGVRLIC PDPAVLEDLL SSGQRIRIVS
VPDLKSSGRD VALYEQQNNE NLVDEVARQA LARGEVLATL EKVKLEATLI DLFRKARSDL
EEGGANTLFL AIGFLKWKKS ADDPKTYSAP LILLPVKLER KSALSGVTLS LLDEEPRFNL
TLLELLRHDF ELLIPGLDGE LPSDESGIDV TGIWNMVRRA VRDVPGFEVS TELVLGTFSF
AKYLMWKDLN ANAAQLLQSP LVKHLLAPSE GDEGFSGSDE FPRPEQLDSS VTPAMLFAPL
PADSSQLSAV VASAGTHSFV MDGPPGTGKS QTIANMIAHN LALGRRVLFV AEKRAALDVV
YRRLAEKGLG EFCLELHSSK ASKVEVLKQL DRAWDVSDAL SAEEWEREAT RLQTLRSRLN
ELVEVLHRRW SNGLSLHQAI GRVVRDHGPQ TPRLSWPSGT QHDADEYSQL LDLSRRLGLN
GDAARNLSGK FGALAQTQWS NAWQAHIANA ARELPQALDA LNAASEKLLG LTHLNLPVAE
VAQVQHLDEL ATLVVESYGL NLSFAFAPDA VARIAAARRA CQLIESYREL EEGLSLDYAD
EACRRIPVEA MRSEWRDAEG KFWFLATFAK KKVAKKLASS GGAAGLPDTL GDLAIFERLH
AQLNELDTLA GGLQSIPGWQ GLSSDVSQIF RAASLAENLR GLMSGLAESP DHLVSLRSAV
ARLVVEANEM LAPGGQIGVA LSALQQALSR YEDAARLFAE LSAVGPDTQS SVGALRATSL
SIQQQEEQLK AWCDWCRVRE QAGEAGLASL ARAVEAGSLS PAASEETFIT AYAHWFATQG
IDDEPLLRNF VAAEHMSDIG AFVRLDDEMA KLTVRYIRAK LCGLIPSKND IPKSSGFAIL
KHELQKSRRH KPVRQLAVEM GDALNRLAPC MLMSPLSIAQ FLPADQPPFD LVIFDEASQI
APWDAIGSIA RGRQVVIAGD PRQMPPTNFF NRGPNASDDD TAEDMESILD ECLGAGVPSH
SLSWHYRSRH ESLIAFSNHR YYDSNLITFP AAETRASAVE WRRVEGVYAK GKGRYNQAEA
EAIVSETVKR LTDPAFVAAG HSIGIITLNA DQQKLINDLL DNARKQYPQI EPFFQDTQTE
PVVVKNLETV QGDERDLIML GIGYGPTEPG AQVMSMNFGP LNKDGGWRRL NVAITRSRRE
MLVFSSFDPS MIDLNRTNAR AVRDLKHFIE FAQRGPKALA EAVQGSVGGY DSPFEEAVAQ
GLRRLGWQVI PQIGVSRFRI DLGVVHPDRP GDYLAGVECD GATYHSAATA RDRDKVRGAI
LSGLGWSLVR LWSTEWWVDK EGALQRLNAA LNDLLAQSRA ETEDHRITEP PTAEPVVIDF
SNGPRISGES SEELAAPISE LSAETGEIRI ARSHGLPPEA GGQKGIYRIA DLSALAPLIQ
ADQFHLPGYT PVLRQLIEEV LRQEAPILDA VLVQRIARVH GFQRSGRLIR DRVLELAEQH
HYVQQAGFDE VFVWHAEGDV AGWTTYRIPA SSEDTRAIEE VAAEELSIAA ANVDAEDKAL
EVARLFGIKR LTGPARERME RIFSA
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