Gene Psyr_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2508 
Symbol 
ID3368025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2916576 
End bp2917340 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content60% 
IMG OID637652856 
Productregulatory proteins, IclR 
Protein accessionYP_235585 
Protein GI66045744 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.750932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG ACACTATCAA GCGCCGGGCA CGTGGACTGG ACCGGGCGTT CGATATCCTG 
GATTTTCTCA AGGAAAAGGC CAGGCCCATG CGCCCCAATG AGATTGCCAG CGGCATCGGC
AGCCCCAAAT CGACGGTTTA CGAGCTGGTG GCCTCGCTGC TGGAACGGCG CATTCTGGAG
ACAGTGGGCA AGGACGGGCA TGTCTATCTT GGCCGTCAGT TGTATTTCCT GGGGCAGGCA
CACTTGCGGC ACTTCGATTT CACTCGCGAG GCCGAAGCCT GCCTGTGCGA GATCGTCAGC
CAGACGCGGG AAACTGCGCA GATGTGCCTG CTCAATGGTC GCAAATACAC CGTGGCACTG
ATGAAGGAGG GCGAGCGTCA TTTCAGGATT TCTTCAGACA TCGGCGAAAA CGCGCCCATT
CCATGGACGG CGTCCGGGCG TCTGTTGCTC AGCCACCTGA GCGATCAGCA GATCATCGAC
CTGATCGACC CCGACGACTT CATTCTGCCG GGGGGCGAAC GTCTGCCGCT GGAGACCTTT
CTTCGGGAAA TCCGCAAGGC CGGCGAGGAG GGCTTCTTTT CTTTCGACAG CGTGGCTGAC
ACCTTCACCC ACTGCTTCGC CGCCCCCGTG AACAACGAAC ACGGTCAGTG CATCGCCACG
CTGTGCATCG TCGCGCCGCG TGCCGACGCC AAGACCCACT ACGACGACTA TCGGCGGGTG
CTGATCGACA GTGCCAATGG CCTGGCTCGC CGTATCAATG AATAA
 
Protein sequence
MTEDTIKRRA RGLDRAFDIL DFLKEKARPM RPNEIASGIG SPKSTVYELV ASLLERRILE 
TVGKDGHVYL GRQLYFLGQA HLRHFDFTRE AEACLCEIVS QTRETAQMCL LNGRKYTVAL
MKEGERHFRI SSDIGENAPI PWTASGRLLL SHLSDQQIID LIDPDDFILP GGERLPLETF
LREIRKAGEE GFFSFDSVAD TFTHCFAAPV NNEHGQCIAT LCIVAPRADA KTHYDDYRRV
LIDSANGLAR RINE