Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2508 |
Symbol | |
ID | 3368025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2916576 |
End bp | 2917340 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652856 |
Product | regulatory proteins, IclR |
Protein accession | YP_235585 |
Protein GI | 66045744 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.750932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG ACACTATCAA GCGCCGGGCA CGTGGACTGG ACCGGGCGTT CGATATCCTG GATTTTCTCA AGGAAAAGGC CAGGCCCATG CGCCCCAATG AGATTGCCAG CGGCATCGGC AGCCCCAAAT CGACGGTTTA CGAGCTGGTG GCCTCGCTGC TGGAACGGCG CATTCTGGAG ACAGTGGGCA AGGACGGGCA TGTCTATCTT GGCCGTCAGT TGTATTTCCT GGGGCAGGCA CACTTGCGGC ACTTCGATTT CACTCGCGAG GCCGAAGCCT GCCTGTGCGA GATCGTCAGC CAGACGCGGG AAACTGCGCA GATGTGCCTG CTCAATGGTC GCAAATACAC CGTGGCACTG ATGAAGGAGG GCGAGCGTCA TTTCAGGATT TCTTCAGACA TCGGCGAAAA CGCGCCCATT CCATGGACGG CGTCCGGGCG TCTGTTGCTC AGCCACCTGA GCGATCAGCA GATCATCGAC CTGATCGACC CCGACGACTT CATTCTGCCG GGGGGCGAAC GTCTGCCGCT GGAGACCTTT CTTCGGGAAA TCCGCAAGGC CGGCGAGGAG GGCTTCTTTT CTTTCGACAG CGTGGCTGAC ACCTTCACCC ACTGCTTCGC CGCCCCCGTG AACAACGAAC ACGGTCAGTG CATCGCCACG CTGTGCATCG TCGCGCCGCG TGCCGACGCC AAGACCCACT ACGACGACTA TCGGCGGGTG CTGATCGACA GTGCCAATGG CCTGGCTCGC CGTATCAATG AATAA
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Protein sequence | MTEDTIKRRA RGLDRAFDIL DFLKEKARPM RPNEIASGIG SPKSTVYELV ASLLERRILE TVGKDGHVYL GRQLYFLGQA HLRHFDFTRE AEACLCEIVS QTRETAQMCL LNGRKYTVAL MKEGERHFRI SSDIGENAPI PWTASGRLLL SHLSDQQIID LIDPDDFILP GGERLPLETF LREIRKAGEE GFFSFDSVAD TFTHCFAAPV NNEHGQCIAT LCIVAPRADA KTHYDDYRRV LIDSANGLAR RINE
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