| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2478 |
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| Symbol | |
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| ID | 3367995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2872283 |
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| End bp | 2874007 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652826 |
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| Product | surface antigen (D15):surface antigen variable number |
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| Protein accession | YP_235555 |
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| Protein GI | 66045714 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.171306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.512577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTT TCAGACTATT CAGCAGCGTT TTCCTGATGA CCATGAGTGC GGCCGCGCTT
GCCCAGGCCC GCCTCGACGT CAGGATCAAG CCTGCCAATC CGCAACTCAA GGCCAACGTC
GAAGGGTATG TCGGTGATCT GGGCGAGCGT GATGCCCAGG CATTGCGCAA CTTCAGCCTC
GGTGCCGAGC AGCAGGCGGA AAAAGCCGCG CAGGCGCTGG GTTATTACCA GGCGCAGATT
GATAGTGAGA TCAAGGACGG AGATCAACCG AGCCTGGTGA TCAACATCCA GCCGGGCGAA
CCCATTCACC TGCGTAACGT GGTGATCCGG GTCGAAGGCC CGGCGGCAGC AATGAAGGCC
TTTCGTGTGC CGAGCAGCGA CGCGCTGAAA ACCGGCGCGG TGTTGAATCA CGGCAATTAT
GAAGACGCCA AGCGTCTGAT CCAGAATCAG GCTTCGCGTT ACGGATTTTT CAGCGGTCAC
TTCACCCGTC AGCGCCTGGC CATCGACCCG CGGGCCGGTG TGGCGGATAT CGAGCTGGTC
TATGAAAGCG GGCCGCGCTA CACGCTCGGC AAGGTCATGT TCAGTGGCGA CGCGCCATTT
GATGACGATC TGCTCAAGCG CATGGTGCCG TTCAAGGAAA ACACGCCTTA CGACTCCCAA
CTGATCGCCG AACTGACCCA GGCCATGCAG GGCAGCGGTT ACTTCGAGGG CGTACGGGTC
GATGCGGCGC CCACCGCAGC GGAAAATCAG GTTATTCCGG TGACCGTTCA GCTCGAAACC
CGCAAGCCTC GCACCATGGG GTTGGGGCTG GGCTATTCGA CTGACGTTGG CCCGCGTGGC
AAAGCCAACT GGACCCGGCA TTGGGCCAAT CCGCAGGGCC ACAGTTATGG TTTCGAATCC
GAGATTTCCG CGCCACGGCA GAATATCGGC CTGTGGTACG ACGTACCGCT CGACCCGCCG
CTGACCGACA AATTGCGCTA CGCCGGTGGG TATCAGTATG AAGAGATCGC CGGAACCGAC
AGCCTCAGCA AATTGCTGAC TGCCGGGCCT GAATGGCACA GCAAGCTGCC CAGCGGCTGG
GAGCGGGTCA TATCCCTGAA ATGGCAGCGT GAAGAATACC GCCTGGGCGA TGACGCCGGC
CTCAGCACGC TGCTGATGCC CGGTATCAGT TACTCGTACC TGCGCAGTGA CAACCGTATC
GACCCGCACC AGGGTTACAG ACTGCAGTTC GACACGCAGG TGGCCAAGGA GGGCATGTTG
TCTGACGCCA ATCTGGTGCA TGCCAACGTG CTGCTCAAAG GGCTGACGAC CGTCGCGCAA
AATCACCGCT TTCTCGGTCG CGTGCAGTTT GGCGGCAACC TCACCGACGG TTACACCTCG
ATACCGCCCT CGCTGCGCTT TTTTGCCGGT GGCGATCAGA GCGTGCGCGG CTATGACTAT
CAGAAGTTGT CACCGACCAA TTCCGACGGC GACCGCATCG GTGGGCGATA CATGTTTGCC
GGTAGCGTCG AATACCAATA TTCCATCGCT GACAAATGGC GCCTGGCGAC CTTCATCGAT
CAGGGCAACT CGTTCAACAG CCTGGACAAG CCAGACCTGA AAACCGGAGT CGGTTTCGGC
GTGCGCTGGG TATCCCCAGT AGGCCCGCTG CGTCTCGATC TGGCCCACGC GCTGGACGAT
GACGGCGGAA TCCGTCTGCA CTTTTCGATG GGGCCGGAGC TTTGA
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| Protein sequence | MKLFRLFSSV FLMTMSAAAL AQARLDVRIK PANPQLKANV EGYVGDLGER DAQALRNFSL
GAEQQAEKAA QALGYYQAQI DSEIKDGDQP SLVINIQPGE PIHLRNVVIR VEGPAAAMKA
FRVPSSDALK TGAVLNHGNY EDAKRLIQNQ ASRYGFFSGH FTRQRLAIDP RAGVADIELV
YESGPRYTLG KVMFSGDAPF DDDLLKRMVP FKENTPYDSQ LIAELTQAMQ GSGYFEGVRV
DAAPTAAENQ VIPVTVQLET RKPRTMGLGL GYSTDVGPRG KANWTRHWAN PQGHSYGFES
EISAPRQNIG LWYDVPLDPP LTDKLRYAGG YQYEEIAGTD SLSKLLTAGP EWHSKLPSGW
ERVISLKWQR EEYRLGDDAG LSTLLMPGIS YSYLRSDNRI DPHQGYRLQF DTQVAKEGML
SDANLVHANV LLKGLTTVAQ NHRFLGRVQF GGNLTDGYTS IPPSLRFFAG GDQSVRGYDY
QKLSPTNSDG DRIGGRYMFA GSVEYQYSIA DKWRLATFID QGNSFNSLDK PDLKTGVGFG
VRWVSPVGPL RLDLAHALDD DGGIRLHFSM GPEL
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