Gene Psyr_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2458 
Symbol 
ID3367975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2846627 
End bp2846944 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content58% 
IMG OID637652806 
Productsterol-binding 
Protein accessionYP_235535 
Protein GI66045694 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0333182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0363969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAG TAGCAGACGC CGTACAGACC ATGAAAAACA AGTTCAACCC AGCTGCTGCT 
GCCGGTCTGG ACCTGGTCTT CGGCTTCAAC ATCACCGACG AAGACAAGCA CTACGCACTG
ATCGTCAAGG ACAGCACCTG CGAACTGCAG GAAGGCGAAA ACCCGGACGC CAACGTGACG
CTGGTCATGG ACAGCCAGAC CCTCAAGGGT ATCGTCAGCG GCGAGACCGA TGGCATGCAG
GCGTTCATGG GTGGCAAGCT GCGTGCCGAA GGCGACATGA TGCTGGCCAT GAAGCTCAGC
GAACTGTTCC CGGTATAA
 
Protein sequence
MTSVADAVQT MKNKFNPAAA AGLDLVFGFN ITDEDKHYAL IVKDSTCELQ EGENPDANVT 
LVMDSQTLKG IVSGETDGMQ AFMGGKLRAE GDMMLAMKLS ELFPV