| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2433 |
|---|
| Symbol | |
|---|
| ID | 3367950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2817368 |
|---|
| End bp | 2817922 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637652781 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_235510 |
|---|
| Protein GI | 66045669 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.157243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0228894 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTG GCACGAGTGC GCTTGAGCAG CTTGTTTCCC GGGCTGTTGT CGGGCGCAAG
ACCGTGGATG AGGTGTCCCA GGACGCCTTC AGCTCGGTCG CTGCCGCTGG CCTGACATCA
GGTTCGGCAC CGGTTACCGC GCAGACCAGC AGTTCGACAT CGCAAGACAG CAAGCAGGAC
AACAGCGGTT ACAACGAATC CTTTGCACGG ATGATGATCA ACCTGAAGTC CGCCGGTGAT
ACGTCACTGT CGGAAAAGAC GGCTGACCGT GACAACGGTG TCATCGGTTC AGTGGCTGGC
ACCACCAGCA CCACTGACAC GGCATCGACG GATTCGGTAC AACAGAAATT CATGGACTCT
CTGAAGCAGA CAGCCGAAGA GAAAGTGCGC GAAAAGCTGA CGGGCATCAC CCAGAAAGAC
TATGACGCCA TGGCGCCACA GGACCAGCTG GCGATTGACC AGAAGGTTCA GGACGCGCTC
AAGGACAAGC AGAACGATGT TGCGGATGAC ATCAACACCC GCATCAGAGG GATCAAGGCC
GGTATGGTGG CTTGA
|
|---|
| Protein sequence | MIIGTSALEQ LVSRAVVGRK TVDEVSQDAF SSVAAAGLTS GSAPVTAQTS SSTSQDSKQD
NSGYNESFAR MMINLKSAGD TSLSEKTADR DNGVIGSVAG TTSTTDTAST DSVQQKFMDS
LKQTAEEKVR EKLTGITQKD YDAMAPQDQL AIDQKVQDAL KDKQNDVADD INTRIRGIKA
GMVA
|
|---|
| |