Gene Psyr_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2235 
Symbol 
ID3367750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2597177 
End bp2598277 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content60% 
IMG OID637652585 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_235316 
Protein GI66045475 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.578291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.613312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATCA TGGAACTCTC ATCATCAGGC AGCACACCCG ATCAAAGCCG CAGGGGCTTT 
CTCAAGCAGT CGCTGGCCGT TTCGGCAACC GTTGCCGCCA TTGGCGCATT GCCGCGTCTT
TCCAGCGCTC AGCCGCTGAC CCAGCGTTAT CCCGACCCTT TGGTCAGTGT GCTGGACGAC
AGCTTTACCC ACATACGAAT ATTCAATGCC AGCGTCGAGA AACTGGCCAG CGGCATGCGC
TGGGCCGAAG GGCCGGTGTG GATCGGTGAC GGTCGCTACC TGCTGGTCAG CGATATTGCC
AACAATCGCA TCATGCGCTG GGACGAGGTG ACGGGTGAGC TGTCGGTGTA CCGCGAGCAC
TCGAACTTTT CCAATGGCAT GTGTCGCGAC CGTCAGGGCC GGCTGCTGGT TTGTGAGGGC
TCCAGCACGA CCACCGAGGG GCGGCGCGTG ACGCGTACCG AGTACAACGG GCGCATCACT
GTGCTGGCCG ACAGATTCGA GGGCAAACCT TTCAATTCGC CCAATGACAT CGCCTGCAAA
CGTGATGGGT CTATCTGGTT CACCGATCCC ACCTTCCAGG CCGAAAGCAA CTACGAAGGT
CAAAAGGTCA AGCAGGAGCA ACCCTTCGGC GTCTATCGCA TAGACCCCGC GAACGGCAAA
GTCTCCAGGG TGATCGATGA TCTGGCAGGT CCGAATGGTT TGTGCTTCTC GCCGGACGAG
AAAACCTTGT ATGTGGTCGA GGGGCGCGCC AAACCCCACG GCCTCATCTG GGCGATAGCG
GTCAACGAAG ACGGCACGCT GGGCGAGCGG GGCAAGCTCA TCGAAGGCCT GGACTACGCG
GCGATCGACG GCATCAAGTG CGACGAGAGC GGCAATCTGT GGTGCGGCTG GGGCGGTAAC
GGTGATCCCA AGGCGGATAT GGAGAAACTC GACGGTGTAC GAGTGTTCAA CCCTCAAGGC
AAGGCCATCG GCCATATCAG CCTGCCCGAG CGCTGCGCCA ACGTCTGCTT CGGCGGGAGA
GAGGGCAATC GGCTGTTCAT GGCCAGCAGC CATTCGCTTT ATTCGGTGTT CGTGAACGCG
CGCGGTGCCA CGTTTGCCTG A
 
Protein sequence
MLIMELSSSG STPDQSRRGF LKQSLAVSAT VAAIGALPRL SSAQPLTQRY PDPLVSVLDD 
SFTHIRIFNA SVEKLASGMR WAEGPVWIGD GRYLLVSDIA NNRIMRWDEV TGELSVYREH
SNFSNGMCRD RQGRLLVCEG SSTTTEGRRV TRTEYNGRIT VLADRFEGKP FNSPNDIACK
RDGSIWFTDP TFQAESNYEG QKVKQEQPFG VYRIDPANGK VSRVIDDLAG PNGLCFSPDE
KTLYVVEGRA KPHGLIWAIA VNEDGTLGER GKLIEGLDYA AIDGIKCDES GNLWCGWGGN
GDPKADMEKL DGVRVFNPQG KAIGHISLPE RCANVCFGGR EGNRLFMASS HSLYSVFVNA
RGATFA