Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2235 |
Symbol | |
ID | 3367750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2597177 |
End bp | 2598277 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652585 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_235316 |
Protein GI | 66045475 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.578291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.613312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCATCA TGGAACTCTC ATCATCAGGC AGCACACCCG ATCAAAGCCG CAGGGGCTTT CTCAAGCAGT CGCTGGCCGT TTCGGCAACC GTTGCCGCCA TTGGCGCATT GCCGCGTCTT TCCAGCGCTC AGCCGCTGAC CCAGCGTTAT CCCGACCCTT TGGTCAGTGT GCTGGACGAC AGCTTTACCC ACATACGAAT ATTCAATGCC AGCGTCGAGA AACTGGCCAG CGGCATGCGC TGGGCCGAAG GGCCGGTGTG GATCGGTGAC GGTCGCTACC TGCTGGTCAG CGATATTGCC AACAATCGCA TCATGCGCTG GGACGAGGTG ACGGGTGAGC TGTCGGTGTA CCGCGAGCAC TCGAACTTTT CCAATGGCAT GTGTCGCGAC CGTCAGGGCC GGCTGCTGGT TTGTGAGGGC TCCAGCACGA CCACCGAGGG GCGGCGCGTG ACGCGTACCG AGTACAACGG GCGCATCACT GTGCTGGCCG ACAGATTCGA GGGCAAACCT TTCAATTCGC CCAATGACAT CGCCTGCAAA CGTGATGGGT CTATCTGGTT CACCGATCCC ACCTTCCAGG CCGAAAGCAA CTACGAAGGT CAAAAGGTCA AGCAGGAGCA ACCCTTCGGC GTCTATCGCA TAGACCCCGC GAACGGCAAA GTCTCCAGGG TGATCGATGA TCTGGCAGGT CCGAATGGTT TGTGCTTCTC GCCGGACGAG AAAACCTTGT ATGTGGTCGA GGGGCGCGCC AAACCCCACG GCCTCATCTG GGCGATAGCG GTCAACGAAG ACGGCACGCT GGGCGAGCGG GGCAAGCTCA TCGAAGGCCT GGACTACGCG GCGATCGACG GCATCAAGTG CGACGAGAGC GGCAATCTGT GGTGCGGCTG GGGCGGTAAC GGTGATCCCA AGGCGGATAT GGAGAAACTC GACGGTGTAC GAGTGTTCAA CCCTCAAGGC AAGGCCATCG GCCATATCAG CCTGCCCGAG CGCTGCGCCA ACGTCTGCTT CGGCGGGAGA GAGGGCAATC GGCTGTTCAT GGCCAGCAGC CATTCGCTTT ATTCGGTGTT CGTGAACGCG CGCGGTGCCA CGTTTGCCTG A
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Protein sequence | MLIMELSSSG STPDQSRRGF LKQSLAVSAT VAAIGALPRL SSAQPLTQRY PDPLVSVLDD SFTHIRIFNA SVEKLASGMR WAEGPVWIGD GRYLLVSDIA NNRIMRWDEV TGELSVYREH SNFSNGMCRD RQGRLLVCEG SSTTTEGRRV TRTEYNGRIT VLADRFEGKP FNSPNDIACK RDGSIWFTDP TFQAESNYEG QKVKQEQPFG VYRIDPANGK VSRVIDDLAG PNGLCFSPDE KTLYVVEGRA KPHGLIWAIA VNEDGTLGER GKLIEGLDYA AIDGIKCDES GNLWCGWGGN GDPKADMEKL DGVRVFNPQG KAIGHISLPE RCANVCFGGR EGNRLFMASS HSLYSVFVNA RGATFA
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