Gene Psyr_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2230 
Symbol 
ID3367745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2592853 
End bp2594154 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content59% 
IMG OID637652580 
ProductMn2+/Fe2+ transporter 
Protein accessionYP_235311 
Protein GI66045470 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.446003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTTA CCCCCTCTCT CAAAGAAACG GCCACGCCAG TAGCCGAACC TCGTCTCAAG 
AAATTTGCAA AATTATTGGG GCCCGGCATC ATCGCCGTGC TGTCCTGGCT GGGCGCGGGC
GATCTGATCA CCTCATCGGT GGCAGGCGCC AGTTATGGTT ACGCCATGAT GTGGGTACTG
GCGATTTCGC TGCTGCTCAG GTTTCTGATC GTCAACATCA TCGCCCGCTT CCAGCTCTGC
AATAACCAGG GCATGACCAT CCTCCAGGGT TACGCGCAAC TGCACCCGCT GTTCGCCTGG
TTCATGCTTG GCTACGCATT GCTCATGGGG CATTTGATCA ACGCCTACAT GATCAAGGGC
GCCGGCGAGG CGCTTGCCAT GCTGCTGCAC ATCGACCAGC CACTGCTCTG CTCCGTCGCA
GTGGTAATTG CCGTGTGGCT GTTGGTGGGC CGCAATATCT ACGCAATGAT CGAAGGCGTA
ATGAAGGTGC TGCTGGCGAT CATGACCCTG GCGTTTCTGA CACTGGCGAT CATGTCCGGG
CCCGACGTCA CCGGCATCAT CAAGGGCACC ATCGGCTTCA GCATTCCGCC TGATGAGGGC
GTGCACGGCG CACTGCTGGT GGCGGTCTCG GTGATCGGTG CCGTAGCCGG GTCGATCGCT
AACTTCGTCC ACCCTTACGT GATGCGTGAA AAAGGCTGGA CCGGCCCGGA GCACAAGCGC
ATCCAGCGCA ACGATCTGCT GTTCGCGGTG ATCGTCGGCA TCGTCATCAA CCTGGCCATC
TGGGTGGTGG GCGTCGAAAT CCTGCGGCCC AACGGTATTC AGGTCAACAC CCTGGCGGAT
TTGGGCAAGG CCCTGGAAAT CTTTTTCGGC CCATTGGGTT GGTACATCTT CTTCATCGGC
GTGTTCGCCA CCCTGTTTGC CAGTATTTCC GGCAAGACCA CAGCCTTTCC GATGCTGATC
ACCGATGCTT TCCAGCACAT CCAGCCCAAG CGCCGCGAAC GCTACGGCAA AGTGTTCCAC
AACGACCCGA TGCACCGGTG GTTCATGCTG TTCATTCTGG TCACCCCGCT GATCTGGTCG
CTGCCCGGCA TGCCGGACTT CGTGACCCTG ACCCTGGGCG TCAACGCGCT GAATATCATC
GGGTTGCCCG TCATCTCGCT GGGGCTACTG ATCATGTCCA ATCAGAAGTC ACTGTTGAGC
AAGGAATACC GCAACAACTG GTTCGAAAAC ATCGCGCTGA CCTTCGCCAC CGGACTGGCG
TTGTGGGTGG CGTTTCAACT CGGGACAGAG TTGCTGGCGT GA
 
Protein sequence
MPLTPSLKET ATPVAEPRLK KFAKLLGPGI IAVLSWLGAG DLITSSVAGA SYGYAMMWVL 
AISLLLRFLI VNIIARFQLC NNQGMTILQG YAQLHPLFAW FMLGYALLMG HLINAYMIKG
AGEALAMLLH IDQPLLCSVA VVIAVWLLVG RNIYAMIEGV MKVLLAIMTL AFLTLAIMSG
PDVTGIIKGT IGFSIPPDEG VHGALLVAVS VIGAVAGSIA NFVHPYVMRE KGWTGPEHKR
IQRNDLLFAV IVGIVINLAI WVVGVEILRP NGIQVNTLAD LGKALEIFFG PLGWYIFFIG
VFATLFASIS GKTTAFPMLI TDAFQHIQPK RRERYGKVFH NDPMHRWFML FILVTPLIWS
LPGMPDFVTL TLGVNALNII GLPVISLGLL IMSNQKSLLS KEYRNNWFEN IALTFATGLA
LWVAFQLGTE LLA