Gene Psyr_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2142 
Symbol 
ID3367656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2500866 
End bp2501894 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content62% 
IMG OID637652491 
ProductFecR protein 
Protein accessionYP_235223 
Protein GI66045382 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0332173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0487008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC CTCTTTTCAG CAAGGCAGAA CACGACGCGA TCACCGATGC CGCTGCGCAT 
TGGTGCATGC GCCTGCATGC AGAAGACTGT ACCGCAGCAG AACGGAAAGC ATTCGAGCAA
TGGCTGAAGG CCCACCCCCT GCATGCGATC GAATACAACG CCATGCTGGA AGTCTGGGAC
ATCACCGGAC AAATCGAACC GCTCAACCCG CCACCTGCGC GCCAAACCCA GGCTGCCCTG
CCCGATCACG TTCGGCCTCG TCGCGGTCGC CGCTGGGCAA AACTGGCCAC AGCCGCAGCG
GTCGTTGCTC TGGCACTGCC GATCGCCGGG TATGTCGGCT GGCATCAGGG CTGGCTGCCT
GACGCCTACG AAACTTACAA CGCCGACACC GCCACACGCC TGGTCATGCT GGAAGACGGC
AGCCGCGCCG AGCTGAACCT GGGTACCGAG CTGACCTACG CCAATTACCG GGATCGACGC
AGCGTCACGC TGACAAAGGG CGAGGCGTTC TTTGAGGTCA GCCACGACAG CTCGCACCCT
TTTGTGGTCG ATGCCGGCGC AGGCAGCATC AGGGTCACCG GCACACGCTT CAACGTATGG
ATGTATCAGG ATCAGGTACG CGTGACGCTG GTCGAGGGTT CGGTTCAGAT CAACAGTGAT
CGTGCACATC CTTCTTCGAG CCACGCCCTG GCCCCCGGCA TGCAGGCCAG TTACAAGGCA
GGCGACGACG CTCCACTGAT CAGCCAGACC GAAGCACGCG ATACCAGCCT GGCGTGGCGC
AATGGCAAGC TGATCTTCAA TGACCTGCCG CTCAGCCAGG CACTGCCGTT GATCAATCGC
TACCTGCAAA CCCCCATTCT GCTGGCGGAC AGTGCAACCG GAGCCATGCG CCTGGGCGGC
AGTTACAACA CTCACGACCT GTCGAGCCTG CTGGGCTCTC TGCCCAAGGT GTTGCCGGTG
TATGTGACGC AGAATCAGAA CGGCAACCCG GTACTCAACC GTCGCACCGC CGACGCTCCG
AAAGGCTGA
 
Protein sequence
MSDPLFSKAE HDAITDAAAH WCMRLHAEDC TAAERKAFEQ WLKAHPLHAI EYNAMLEVWD 
ITGQIEPLNP PPARQTQAAL PDHVRPRRGR RWAKLATAAA VVALALPIAG YVGWHQGWLP
DAYETYNADT ATRLVMLEDG SRAELNLGTE LTYANYRDRR SVTLTKGEAF FEVSHDSSHP
FVVDAGAGSI RVTGTRFNVW MYQDQVRVTL VEGSVQINSD RAHPSSSHAL APGMQASYKA
GDDAPLISQT EARDTSLAWR NGKLIFNDLP LSQALPLINR YLQTPILLAD SATGAMRLGG
SYNTHDLSSL LGSLPKVLPV YVTQNQNGNP VLNRRTADAP KG