| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2122 |
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| Symbol | |
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| ID | 3367636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2479963 |
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| End bp | 2480682 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652471 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_235203 |
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| Protein GI | 66045362 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.515769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.232569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCCG CGGACAACAG CCGCTTCGTC ATTCGTGACC GAAACTGGCA TCCAAAAGCG
CTCACACCTG ATTACAAGAC CTCGATCCTG CGCTCGCCGC GCCAGGCGCT GGTCAGTATC
CCGCAGTCCA TTTCCGAAAC CACCGGCCCG GATTTCTCGC ATTTGAAATT CGGCCAGCAC
GATAACGACC TGCTGCTCAA TTTCAACAAC GGTGGGCTGC CCATCGGTGA GCGTATTCTG
CTGGCCGGGC GGGTCTGCGA TCAGTATGGA AAGCCGATCC CGCATACCCT GGTGGAGATC
TGGCAGGCCA ACGCCGGCGG GCGTTATCGC CACAAGCGCG ATGCCTATCT GGCGCCCATC
GATCCCAATT TCGGCGGCGT CGGACGTGCG TTGACCGACA GCGAAGGCAA TTACAGCTTC
CGTACCGTCA AGCCAGGGCC TTACCCATGG CGCAACGGTC CCAACGACTG GCGCCCGGCA
CACATTCATG TGTCGATCAG CGGGCCGTCG ATTGCCACAC GGCTGATCAC CCAGTTGTAT
TTCGAAGGCG ATCCGCTGAT TCCGATCTGC CCGATCGTCA AGGCCATCGC CAACCCGGAC
GCCGTGCAGA GCCTGATTGC CAGGCTCGAC CTGGGCATGG GCAATCCAAT GGATTGCCTG
GCGTATCGCT TTGATATCGT GTTGCGCGGC CAGCGCAAGA CTCACTTCGA AAACTGCTGA
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| Protein sequence | MSAADNSRFV IRDRNWHPKA LTPDYKTSIL RSPRQALVSI PQSISETTGP DFSHLKFGQH
DNDLLLNFNN GGLPIGERIL LAGRVCDQYG KPIPHTLVEI WQANAGGRYR HKRDAYLAPI
DPNFGGVGRA LTDSEGNYSF RTVKPGPYPW RNGPNDWRPA HIHVSISGPS IATRLITQLY
FEGDPLIPIC PIVKAIANPD AVQSLIARLD LGMGNPMDCL AYRFDIVLRG QRKTHFENC
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