| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1858 |
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| Symbol | |
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| ID | 3367367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2135456 |
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| End bp | 2136178 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637652206 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_234943 |
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| Protein GI | 66045102 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.968511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.429654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGCAGTG CCATGACAGA AAGCGCAACC AGGGACTTAT TGATACAGCA GATGGTGAGC
ACGATTACCG AGCTCGATGG GCAGACCGCC ATCGAAAATG CACTCGAGTG GTTACGGCGC
GAATGCAACA GCGAGCGCGC GATGTTCTTT CAGTTCAAGG GTCCGCTGTT GCTGACGTTC
ATCACCTCCA ACGTCGACGA AGCGTGGGGC GATGCCTACC GTCAGCACGA TCTGATCATG
CAGGACCCGG TAATCCGTTG TTATCGCAAT CAACTGGGCT TCCTGAACTG GCAGGATGCG
TTCAGGCAAT ACCCGGTATC CGCCTTTTAT GACGAGCTGG TCGATGCCTG TGAACTGCTT
CCGGCCATCT CCTATGGCTA TACCAATCAT TGCCGTGGTG CTGACAGCGT GACATCGGTG
TGTACCCTGG GCGAAGTGGA GCGGCCCATC AGCGCTGAAC AAAAGTACCT CATGAGCAGT
CTCATGCCGG TGCTGCACAG TGTCGCGCGG GGTCTGAAGT TCTGTTCGCG CGGTCTGACC
CATCGTGAGC TGGAAGTCTT GCAGTGGGCC AGAGACGGGA AGACGGCCTG GGAGATCTCG
ATGATCCGCG ACGTGTCGGA GTCGACGGTG AAGTATCACC TCAAGACCAT CTACTCCAAG
CTCGGCGTTG CCAACAGGGC ACAAGCGGTG GGCGAAGCAC TGTGTCGTGG CCTTATCAGA
TAG
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| Protein sequence | MCSAMTESAT RDLLIQQMVS TITELDGQTA IENALEWLRR ECNSERAMFF QFKGPLLLTF
ITSNVDEAWG DAYRQHDLIM QDPVIRCYRN QLGFLNWQDA FRQYPVSAFY DELVDACELL
PAISYGYTNH CRGADSVTSV CTLGEVERPI SAEQKYLMSS LMPVLHSVAR GLKFCSRGLT
HRELEVLQWA RDGKTAWEIS MIRDVSESTV KYHLKTIYSK LGVANRAQAV GEALCRGLIR
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