Gene Psyr_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1828 
Symbol 
ID3367337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2108925 
End bp2110067 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content64% 
IMG OID637652176 
Producterythronate-4-phosphate dehydrogenase 
Protein accessionYP_234913 
Protein GI66045072 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.564844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTG TTGCCGACGA AAATATTCCC CTGCTCGACG CCTTTTTTGC TCATTTTGGT 
GAAATCCATC GCTTGCCGGG CCGCGCCATG GATCGCGCCG CGGTGGCGGA TGCCGACATC
CTGCTGGTTC GCTCGGTCAC CGCAGTGACC CGCGAACTGC TTGAAGGCAG CCCGGTACGT
TTTGTCGGGA CCTGCACCAT CGGCACCGAT CACCTGGATC TGGACTGGTT TCAGCAAGCC
GGTATCCAGT GGGCCAGTGC TCCGGGCTGC AATGCGCGTG GCGTGGTGGA CTACGTGCTC
GGCAGCCTGC TGACCCTGGC TGAAATCGAA GGTGTCGACC TTGCGCAGCG CACCTACGGA
GTGGTCGGTG CAGGGCAGGT GGGTGCTCGG CTGATCAGCG TATTGAAGGC CCTGGGCTGG
AACGTGCTGG TCTGCGATCC GCCACGCCAG GCTGCCGAAG GCGGCGATTT CGTCAGCCTC
GACGAGATCC TGCAGCGCTG TGACGTCATC AGCCTGCACA CGCCGCTGAG CAAAACCGGA
GCGTCACCGA CCTGGCATCT GCTTGACGAC GCGCGCCTGC GTCAGCTTCG GCAAGGCGCC
TGGCTGATCA ATGCCAGCCG TGGCGCCGTG GTGGATAACG CGGCGCTGCA TGACGTCCTG
CTTGAGCGGG AAGACCTGCA GGCCGTGCTG GATGTGTGGG AAGGCGAGCC GCAGGTCAAC
GTCGCACTCG CTGATCTGTG CATTCTGGGG ACGCCGCATA TCGCCGGCTA CAGCCTGGAT
GGCAGGCAGC GCGGCACGGC ACAGATCTAT CAGGCGCTGT GCGGCTTTCT TGATCAGCCT
GCGACGATCG AGCTGGACGA TCTGCTGCCA AAACCCTGGC TGGCCCAGGT CAGTCTCGAC
GCGGCCTGCG ACCCGGTCTG GGCACTTAAC ATGCTGTGCC GCGGCGTGTA TGACCCGCGA
CGTGACGATG CGGACTTCCG CCGCAGCCTG ACCGGTGACA CCGCCAGCCA GCGTCTGGCC
TTTGATGCAT TGCGCAAGCA GTACCCGCCA CGCCGGGAAA TAGAAGGGCT GAAGGTGCGC
CTGGAGGGCG AGTCCGAGGC GTTGGCGCAA CTGGTGCGGG CGCTGGGTGC GGTGCTGGTC
TGA
 
Protein sequence
MRIVADENIP LLDAFFAHFG EIHRLPGRAM DRAAVADADI LLVRSVTAVT RELLEGSPVR 
FVGTCTIGTD HLDLDWFQQA GIQWASAPGC NARGVVDYVL GSLLTLAEIE GVDLAQRTYG
VVGAGQVGAR LISVLKALGW NVLVCDPPRQ AAEGGDFVSL DEILQRCDVI SLHTPLSKTG
ASPTWHLLDD ARLRQLRQGA WLINASRGAV VDNAALHDVL LEREDLQAVL DVWEGEPQVN
VALADLCILG TPHIAGYSLD GRQRGTAQIY QALCGFLDQP ATIELDDLLP KPWLAQVSLD
AACDPVWALN MLCRGVYDPR RDDADFRRSL TGDTASQRLA FDALRKQYPP RREIEGLKVR
LEGESEALAQ LVRALGAVLV