Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1804 |
Symbol | |
ID | 3367312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2077457 |
End bp | 2078242 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637652152 |
Product | hypothetical protein |
Protein accession | YP_234889 |
Protein GI | 66045048 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3248] Nucleoside-binding outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0626239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.487257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCGTA CGATTTCCAG TGCATTACTG GCCAGCAGTC TGCTGGCTGC TGCACCCGCC ATGGCAGGGG ATATTTTCCA GTGGCAGAGT AATAGCCTGA CCTATCTCAA TGGACGAGAC TTTGCTGTCA ACCCGGAAAA TCAGCAGACC TTTACCTTTG AGCACGCGGA CAGCTGGAAG TACGGCGACA ACTTCTTCTT CGTCGACAAG ATCTTCTACA ACGGCAAGAA AGACGCCACC GCTGGCGATA ACACCTATTA CGGCGAGTTC TCGCCACGCC TGTCGCTGGG CAAGATCTTC GGCCAGAAGT TCGAGTTCGG GCCGATCAGC GATGTGCTGA TTGCCGCAAC TTACGAGTTC GGTGAGGGCG ATAACGAGTC GTACCTGATC GGTCCGGCGT TCGACTTGAA GATTCCGGGC TTCGACTACT TCCAGCTCAA CTTCTACCAG CGCCAGACCG AAGGCAATCG CCCGGGTGAC GGCGTGTGGC AGATCACTCC GGTGTGGTCC TACACCATTC CGGTGGGCAA ATCGGATGTG CTGATCGACG GTTTCATGGA CTGGGTGGTC GACAACGACA AGACCTCGCG TGGCACTTAC CACTCCAACC TGCACTTCAA CCCGCAGATC AAGTATGACC TGGGCAAGGC ATTGAATTAC CCGGAGCGGC AGCTGTACGT GGGTATCGAA TACGACTACT GGACCAACAA ATACGGCATC AAGGACACCA GCTCCTTCGA CACCGATCAG AACACCGCGA GCTTGCTGGT GAAGGTGTTC TTCTAA
|
Protein sequence | MNRTISSALL ASSLLAAAPA MAGDIFQWQS NSLTYLNGRD FAVNPENQQT FTFEHADSWK YGDNFFFVDK IFYNGKKDAT AGDNTYYGEF SPRLSLGKIF GQKFEFGPIS DVLIAATYEF GEGDNESYLI GPAFDLKIPG FDYFQLNFYQ RQTEGNRPGD GVWQITPVWS YTIPVGKSDV LIDGFMDWVV DNDKTSRGTY HSNLHFNPQI KYDLGKALNY PERQLYVGIE YDYWTNKYGI KDTSSFDTDQ NTASLLVKVF F
|
| |