| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1803 |
|---|
| Symbol | |
|---|
| ID | 3367311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2076321 |
|---|
| End bp | 2077280 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637652151 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234888 |
|---|
| Protein GI | 66045047 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2354] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.179201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.186215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAT CAGTGCCGTT TCCTTTTTTT ACTTGCTCAA GGATTTTCAT TTTGGCTGCT
GGAAGCTTGC TTACCCTGCT TGACGATATT GCGACGCTGC TCGATGACGT GGCACTGGCC
ACGAAGAAGA CGGCGGGTGT GCTGGGTGAT GATCTGGCGC TCAATGCCCA GCAGGTCACC
GGTGTTTCGG CGGATCGCGA GTTGCCGGTT GTCTGGGCCG TGGCCAAGGG GTCGCTGCTC
AACAAGGCCA TTCTGGTTCC GGCAGCGTTG CTGATCAGTG CTTTCGCACC CTGGGCGATT
CTGCCGTTGC TGATGATCGG CGGTGCGTTT CTGTGCTTCG AGGGCTTCGA GAAAATCGCC
CATAAATGGC TGCATCCCGA AACCGGCGAA GAGCATGAGC AGCGCAAGCA GGCGTCGACG
GATGCCTCAG TGGACATGGT GGCGTTCGAA AAGGAGCGCG TAAAAGGCGC GATTCGTACG
GACTTCATTC TTTCTGCGGA AATCATCGTG CTCGCACTGG GTGTGGTCTC GGCCAGACCC
TTCATGGATC AGGTCGGTGT GCTGGTCATC GTCGCAGTGC TGATCACCGT CGGTGTCTAC
GGGCTGGTGG CCGGTATCGT CAAACTCGAT GACCTGGGCC TGTACCTGAA GAAAAGCGCA
GGTTCGGCGT CACAAAAGAT CGGTGCCGGC CTGTTGTGGC TGGCACCGGT GTTGATGAAA
GTGCTGTCGA TCGTCGGTAC GGCTGCGATG TTCATGGTCG GCGGCGGGAT TCTGGTCCAC
GGCCTGCCGT TCGCTCATCA TTGGGTCGAA GGCGTGACCG AAGCGGCAGC CGGTGCGGTA
GGCGGTCTGT CGATGGTTGT TCCGACGCTG ATCGATGCGC TCGCCGGGGT CATTGCCGGT
GCCGTGCTGG TGCTGGTCGT GACGTTGATT GGCAAGGTCT GGAAAGCTGC GAAGGAGTGA
|
|---|
| Protein sequence | MIQSVPFPFF TCSRIFILAA GSLLTLLDDI ATLLDDVALA TKKTAGVLGD DLALNAQQVT
GVSADRELPV VWAVAKGSLL NKAILVPAAL LISAFAPWAI LPLLMIGGAF LCFEGFEKIA
HKWLHPETGE EHEQRKQAST DASVDMVAFE KERVKGAIRT DFILSAEIIV LALGVVSARP
FMDQVGVLVI VAVLITVGVY GLVAGIVKLD DLGLYLKKSA GSASQKIGAG LLWLAPVLMK
VLSIVGTAAM FMVGGGILVH GLPFAHHWVE GVTEAAAGAV GGLSMVVPTL IDALAGVIAG
AVLVLVVTLI GKVWKAAKE
|
|---|
| |