Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1768 |
Symbol | |
ID | 3367276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2007757 |
End bp | 2012985 |
Gene Length | 5229 bp |
Protein Length | 1742 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637652117 |
Product | hypothetical protein |
Protein accession | YP_234854 |
Protein GI | 66045013 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCAG CACTGCCGTA TTTCTTCAGT GAGGCTCTGC GGAGCAGATT TACACAGGAC ATCCAGTACG CAACGGATGA GGCTCGAATT ACCAGCGACG AAGGACGGTG GCTAAGGTCA CTGGTCGCTA CAGACACTTC AGCAGATTCC GGCACGACCT TCCCGAGAGT CGACAGGCTG ACAATTGAAG ACGGCTCCGC AGGCAATGCC GAGCTGGCCG GAGCATTGTT CATCAGTGAT CCCGATAACG CTGACGCTCC TGTTTTTCTG AGTACATTGG CGTTCGGGAT CGAGCGATTT GCGAGCCGTA GTTTGCTACT CGCCGGATTG CAGCAGCGGT TGGCCGAGGT CAGCGACATG TCGATTGTCG AAGCCGATCG TGTCGAAGAT GCGTTGTTCG AAGCGCGCAG TCTCGCGGTG ATACGCCAGC AAGCCCGGTA CCTGGAAGAC CTGTGGACAC TGTTACAGGA CTTGCCTGAT CTGTATTCAG CCTGTGGCAA GGCTTTGCAG GCGGTTCTGT TGGCGCGTGG GTTGGGAGAC GGCATCGACG TCTTCACTCA GATCGTGCAG ATCCTGGAAA TGTCCCCTGC TGCCGACCCG GGACTGCCAT CGGTCGTGGG CACCCAATAC CTGGTCGATG CCGCTGTGCA GGTCTTCATC GGCGAGTTGA TTCCGACAGG TCTGACGCGG CAGTTTCTGG ATGCCAGGGG GGTTATCCTG TCCCGGGCCC AGTCAACGCT CTTCGAGCAA GCATTGTCTG ACTCGGTTTC CGCAGTCAGC GCTGCCTACG AGCAGTTGCT GGCTGACTAC TGGACGTCCC TAAGGCCCGA CGGCCGGACC GTGAAGGACT TCGCCACCCG CGCCTTGGCA GAGTGCTTTC GTCAGCACCT GCTGTCGAGC CGGGCACATG GCGCGATGAC GGACGCGGAG TATCGCCATT TGCTCACCCT GTTGCCTTCA TCCCCTGAAG CGATCGATGC ACAATCGATC AGGGTCCGGA GGTTGTCGGT GTCTGTGGCG GGGGAGGAGC CGGTCAAGCT GGTCGGTGTG GCCCTGATCG AGTTCCCGGC GGACGAACTG GCGGGTGTAT ACCTTTACTC CTCGTTATCG GGTTTGCTGC GCTTCAGCGA TTCGGCCAAC GCCATCGAGC ACGTCCTGAG CGACCCTTCA CGTAACGGAA TGCTGTTTTA TTCTTCGCTG GACGATCATG TTTCCATCCG GATGCAAGGA CCCGTGGAGG TGCGTCAGGA TACGCTCGCC ACGGAGTTTT TCAGTGATTT CGTCGGGTCG CTCATCGCCC TGCAAAAGCG CAATCTGCGT TACGCGCTGG CGTTGCCGGC CATCGATGCG GCAAAAATTC CCGTCCGGGT TGATGATGCG CTGGATATTC GGGGGCTGCT GGACGGCCGA TTGCTGAATC TGCACGACTC AGGACGCTGG CGCTCGGAAC GTCTGACCTT TGATCAGGCC TGGGGTGCCT CTGTGCAAAC CACCAGTGTG CAGCCGAGCC TCATTCCCGA GCCGTCCTAT AACTGGGTCA GCAAACTGAA AAAGCTCGAC TGGATGCTTG AGCGCGTTGA TGCCCTGCAT ACGGGCGTGG ACAGCTGCAT GCGTCTTGCG CTGAACCGCT ATCTGGCAGT GATTGGCGGC CCGCATCTTG ATGCATGGAT GCTCTGGGTG TTACCGGATG CCATCGATGC GCCGCCCGTG CGCCTGCTTT CGTTGGCGCT TGACCGCGTT TGCGGTTATG CACCGGCACC TCTGTCAGGC GGCGTGGTTC TTGCCGGGCT GCTGAAGCCG GTTATGGATC AACCGGTGCA ACGTTTGCCC TTGGCATTGA TCGAGCAGAT TCTGTCCTGT GTCCAGCTGG ATTTCCCTCG CCGCTTCAAC GAGCAGATAA GCGAATTCTA TTCACGCTCG ATACGTCATC TGGATACCCG ATTACGGCCC GACGTGATGT GCGGTCTGAT TCGGGAGTAC TCGCTGCGTC TGGAACTGCT GGTTGAAAAA CGCATCGCTA CGCTTCCTGA TTCGGTCATC GCGAACGTCC AGCAAGTACT GGACAGACCG TTACCAGCGC TCAGGGCTGC GCTGGGCGAG GCGCGTGTCG ATGCTTTTAC CGTCTCGGTC GAGTACGACC CGCAATCAGC CGCGATCAAA GTGCCCAATG CATTCGTGAT CAATAACAGG TTGCCCGGCA ACAAGCCCGC TCTGTGGATA GTGAACAAGG GGCTCATATG TTTCGAAACC CTGCAGGTAC TGGAACAGTA TGTTGCTGAG CGGTTTACCG GCAAAGAACT GGGATCGCAC TTGCCCGGCG TTCTTGCCGA GCCTGACCGG CAGACGTTGC TCGACTATCG TGCCCGGAAG GGTGCTCTCA CCCTCAAGGT CGTATTGCAG CGCATCGAAG GGCATTTCAT CGAGGCCTTG CAACACGACG AGATAGAGCG TCAGCGGCGC ACGATGGCAG AACTTTATCA GCAGGCCGTG ACCTGGCGTG TGCCGTCAGA ACTGTTTGTC AACCTGTTGG GGGCAGGGGA GCGGGATGAC CGAAATCGCC AGAACCTCAG CCATCTGGGC GTCGCCATTC AGTTCATCAT CTACAAAGCC ATCGTGCCCT CATGGGTCCG CGAAGCGTCC AGGGCCGATC AGGTTATGCT GATTGATGCC CTGCGGCGTT TCTATGTGAC CTGTGCCGGA AAGAAAGACT TTCTGTTTGA TATTCCCAGC CTCTACGAAT ACTCCTGTGA ACAACTGAGA CTCAGGTTCC AGACCGATTT CACCGAGCCT CGTCCGGATC CTGAAAACAT CCGGGTTACC CTGAAGCATT TTGTTCCCGC TCCAGTCGCG CCGGGGCAGA CGCCTCAATC GATACCGGCG GCCACGGACG CAGTCAGTGA AAACCTGGCG GAGTTTGCCA TCAACCGTTT CCTGTCCAGG CAGGACGGCG TCATTCTTCT CTCGTCACGA GATGATCAGC CGCTGAACGC GTCGCTGACG CCGGCTTATG TGCGTGAGCT GGTGAAGTCG CTGGACATTG CCGCAGGTTA CCGGAGCCTG CTGGACTCGC GGCTGGCCGT GACGGCTGCG GATTATCCGG AGCGACGCAG GCTGTTCGTC GAACAGGTCC CTTCTCTCGA TATTCTGCAA GCGTTTGCGC TCCGGCTTAA AAATGAGCTC ACCGAGCAAG CCTACCAAGT GATTGAAAAT GTGCTGAGCA TGCCTGATGC CATCGCGCGA CTTCCTGTCA ACGGCTGCAA AGTGGTGCTG AGCCCCTTGC AATTGCTCCC TGCCAAAGAA GGCTGGGAGC CGACTGTCGT ACTGAATACG TATCTGATGG GGCCGATGGA CAACCAGCCG GGACCGTGGG TGCTTTACGC GCCGCTGCAT GAAGATTTCG TTTTCAAGGA ATACCCGGAT CGGGCCGCGC TGTTGCATGA CATACACACC TCTGCGTTTC TTCAACAATA CATTCTGGAT CGTGTTGATC CCGATGTGCG CAAGCTCTAC GACAACGGTG GCTTTATGGA GCCGCACCTG CCTTTCAGTG CAGAGTCTTC GTTTGATTTT CCTTTTGAAA CACCTGCACC GGTCACCCTG CAAATCGACC CGTATGAGGG AAACTGTCTG CTGCTGATGT TCAGGGGCGC CCTCGATATC CTGAAATTAC AGGTGCAACA GCACAGCGTT ACCAATGCCG AACAGCACCG TGCTACGTCC CGCTACCTGT TCACGCTGGG CGCCGAGCAA GTCATGGCGC TCATGCCGGG GAGGGTGGGT GCGTTGATCG GCATTATCCA GGGGCAGACG CTGCTGAATA TGTCGGTCAT CTCGGCCGGG GATCAGAGCT GGGGCAAGGC TTTTTCGGAG TTCATGGCTG CTCTGAGTGT GATGATTTCT TCTGGACAGG CGCCCTCGGC ATTCCCGTCA CGGGCGGTTG ACGAGGTCAA CATGACAGCG GAGGAAGCTG TCCTGTCTGA CCCGCTTGTA CAGCTGGATG ACGACGCCGA TGTGCCCGAG TTTTCCTGGA GCAACAGCTC ACTGACCCAG CAGATACGAG AGCGGCTGCG CCAATTCGAA GTGCATGATG TTGCCTTGAA CACGCTGCAA AGAGATGAGT TGTTGAGTAC CTACCACGAT CCGCTCCCAA ATAGAGAGTA TGCAGCCATT GGTGGCAAGA TCTACGAATT GAAGTCTGAT GCTAACGGCT GGTTCATCGT CTCGGGAACC ATGGTAGGGC CCCCGGTCAG TCTTGATGCG GACCAGCAAT GGAAGCTTGA TATCCAGGGC GGGCTGAGGG GCGGAGGGGG CGCGCTGACG CGTATGGAGG GCAGCCTTGT CGACGACCTG GTTGACGACA TAATGGTTGT AAACGCCCGG GGGATGTCCG AGATCCGCCA CTCATACCGG GAAATGGCCC TGGCCATCGA GGACGCGCAC AAGCAGGCGC AGTACTATCT GGAAAACAGC CTGGCCAACC TGGCGATACC CGAGTCTGCC AAAGCAGTCG AACCACGCAC GGAAAAAATC ATCGCCGATT TCTTTGGTCA GAAGAATCCG GACGACCGAT TGTACGACGT CACTAAAAAG ACAATTACCG ATATTTATCA GGAATTGATG AACCCTTCGA TGTCGCCCAT CGACTCACAG CGTTATGTGG TGGGTATCAA CCGGATGGGC AATGAGGCCT CCAGCGCATT CATCTTCGAG GCGGATCCGT TGAGGCGGGT ATTCCTGACT GAACAGTTCT TTCGTGTACC TACTTACCGT TTCAAGCTCA GCGCCATTCG TTCAGGTGAA TTCAAGCATG CTCCGCATTA TCGCGCTGCC ATTCTGATTC ACGAGTTATC GCATATGGTG CTCAAGACCG ACGACATTGC CTATGTCGAC TCTCAGGCCC CGTTCATTGA CCTGATCGAG GATACCCCCA CGTATCGATT GCGCATCAGG AATGAACTGA TTACCCAGCA GCAGAAAACC CTGTCCTACC AGACTGACCG CGACAAGCTG TTCAAACAAC TGGATGAAGA CACGTGGCGC GATTTGCGGC GAATGGACGG TAACGGCAAA CAGACGATTC TGCGTATCTG CGGCAAGAAG ACCCTCGAAG AAGCGCGTGA TGTGTTTTAC CAGGACGTCC ACAAACGTAC CGACGTCATG CTCAAAAATG CGGATTCCGT GGCGTTGCTG GTGACATTGC TGGGGCGCGA GCGCTTTGTG AGGCGCTGA
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Protein sequence | MPAALPYFFS EALRSRFTQD IQYATDEARI TSDEGRWLRS LVATDTSADS GTTFPRVDRL TIEDGSAGNA ELAGALFISD PDNADAPVFL STLAFGIERF ASRSLLLAGL QQRLAEVSDM SIVEADRVED ALFEARSLAV IRQQARYLED LWTLLQDLPD LYSACGKALQ AVLLARGLGD GIDVFTQIVQ ILEMSPAADP GLPSVVGTQY LVDAAVQVFI GELIPTGLTR QFLDARGVIL SRAQSTLFEQ ALSDSVSAVS AAYEQLLADY WTSLRPDGRT VKDFATRALA ECFRQHLLSS RAHGAMTDAE YRHLLTLLPS SPEAIDAQSI RVRRLSVSVA GEEPVKLVGV ALIEFPADEL AGVYLYSSLS GLLRFSDSAN AIEHVLSDPS RNGMLFYSSL DDHVSIRMQG PVEVRQDTLA TEFFSDFVGS LIALQKRNLR YALALPAIDA AKIPVRVDDA LDIRGLLDGR LLNLHDSGRW RSERLTFDQA WGASVQTTSV QPSLIPEPSY NWVSKLKKLD WMLERVDALH TGVDSCMRLA LNRYLAVIGG PHLDAWMLWV LPDAIDAPPV RLLSLALDRV CGYAPAPLSG GVVLAGLLKP VMDQPVQRLP LALIEQILSC VQLDFPRRFN EQISEFYSRS IRHLDTRLRP DVMCGLIREY SLRLELLVEK RIATLPDSVI ANVQQVLDRP LPALRAALGE ARVDAFTVSV EYDPQSAAIK VPNAFVINNR LPGNKPALWI VNKGLICFET LQVLEQYVAE RFTGKELGSH LPGVLAEPDR QTLLDYRARK GALTLKVVLQ RIEGHFIEAL QHDEIERQRR TMAELYQQAV TWRVPSELFV NLLGAGERDD RNRQNLSHLG VAIQFIIYKA IVPSWVREAS RADQVMLIDA LRRFYVTCAG KKDFLFDIPS LYEYSCEQLR LRFQTDFTEP RPDPENIRVT LKHFVPAPVA PGQTPQSIPA ATDAVSENLA EFAINRFLSR QDGVILLSSR DDQPLNASLT PAYVRELVKS LDIAAGYRSL LDSRLAVTAA DYPERRRLFV EQVPSLDILQ AFALRLKNEL TEQAYQVIEN VLSMPDAIAR LPVNGCKVVL SPLQLLPAKE GWEPTVVLNT YLMGPMDNQP GPWVLYAPLH EDFVFKEYPD RAALLHDIHT SAFLQQYILD RVDPDVRKLY DNGGFMEPHL PFSAESSFDF PFETPAPVTL QIDPYEGNCL LLMFRGALDI LKLQVQQHSV TNAEQHRATS RYLFTLGAEQ VMALMPGRVG ALIGIIQGQT LLNMSVISAG DQSWGKAFSE FMAALSVMIS SGQAPSAFPS RAVDEVNMTA EEAVLSDPLV QLDDDADVPE FSWSNSSLTQ QIRERLRQFE VHDVALNTLQ RDELLSTYHD PLPNREYAAI GGKIYELKSD ANGWFIVSGT MVGPPVSLDA DQQWKLDIQG GLRGGGGALT RMEGSLVDDL VDDIMVVNAR GMSEIRHSYR EMALAIEDAH KQAQYYLENS LANLAIPESA KAVEPRTEKI IADFFGQKNP DDRLYDVTKK TITDIYQELM NPSMSPIDSQ RYVVGINRMG NEASSAFIFE ADPLRRVFLT EQFFRVPTYR FKLSAIRSGE FKHAPHYRAA ILIHELSHMV LKTDDIAYVD SQAPFIDLIE DTPTYRLRIR NELITQQQKT LSYQTDRDKL FKQLDEDTWR DLRRMDGNGK QTILRICGKK TLEEARDVFY QDVHKRTDVM LKNADSVALL VTLLGRERFV RR
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