| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1693 |
|---|
| Symbol | |
|---|
| ID | 3367198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1901525 |
|---|
| End bp | 1902232 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637652039 |
|---|
| Product | PspA/IM30 |
|---|
| Protein accession | YP_234779 |
|---|
| Protein GI | 66044938 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.509577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.622642 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACAA GTATCTGGAA AAAACTGGTG ACCGCTGTTC GTGGCGGCGC TTCCGAAGTG
GGCGAGTCGA TTGCCGACGC CAATGCCATC CGCATTCTGG ACCAGGAAAT CCGCGACGCC
GAGAACGCGC TGGTCAAGGC CCGCGACGGG CTGATCACCA TCAAGGCCAA GCACAAACTT
TCGGCACAGC GTCTTGAAGA GCACGCTACC AGCATTGCCA ACTGGGAAGG CCGCGCCATG
CAGGCCCTGA ACAAGGGTGA AGAAGCCCTG GCCGTAGAAT GCGCGAACAA GATCGCCGAA
ATCGAAGCCC TGCGTGATCA GGAGCAGGAA CTGGCCGACC AGTTCAGCAA GCAGGTCAAC
CTGCTGCAGG ATCAGGTGAT CAAGGCCGAA TCGCGAATCA AGAGCCTCAA GCAGCAGGTC
GAGATGGCCA AGGCCCGTGA AACCGTGCAA AAGGCCCGCG TTGCAACGGC TACTGCAACC
GGTGGTGCCA GTGGCGCCGT CGAAACCGCA GTCGGCTCGC TGGCACGTCT CAAGCAGCGC
CAGGATGAAC AGGACGCCAA GCTCGAAGCA GCTGAAGAAC TGGCCACCCA GTCCAGCGGC
AGCGATCTGG AGCGTCGTCT GCAGGATGCC GGAATCGGTG CTAAAAGCGG CGGTGCGCAA
GATGTACTGG CGCGCCTGAA AGCCAAAAGT CAGACGCCGG CTCAGTAA
|
|---|
| Protein sequence | MTTSIWKKLV TAVRGGASEV GESIADANAI RILDQEIRDA ENALVKARDG LITIKAKHKL
SAQRLEEHAT SIANWEGRAM QALNKGEEAL AVECANKIAE IEALRDQEQE LADQFSKQVN
LLQDQVIKAE SRIKSLKQQV EMAKARETVQ KARVATATAT GGASGAVETA VGSLARLKQR
QDEQDAKLEA AEELATQSSG SDLERRLQDA GIGAKSGGAQ DVLARLKAKS QTPAQ
|
|---|
| |