Gene Psyr_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1676 
Symbol 
ID3367181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1884592 
End bp1885536 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content66% 
IMG OID637652022 
Product1-aminocyclopropane-1-carboxylate deaminase, putative 
Protein accessionYP_234762 
Protein GI66044921 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2515] 1-aminocyclopropane-1-carboxylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.334967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTCG ACGCCCTCGG CTGGCAACCC ACTGCTCCCC TGGAACGCTT GAACCTGCCC 
TGGCTGCAAG ACACCGGGGT CGAGGTTGCG ATCCTGCGCC TGGACCTTAT CGACGCGCTG
ATCAGCGGTA ACAAATGGTT CAAGCTCAGC GAGCACCTCA GTCTGGCTGT TGATTCGGGT
GCCGAGGGGT TGATCAGCCT CGGCGGCGCA CATTCCAATC ATCTGCATGC CCTGGCCGCT
GCAGGCAAAC GCTTCGGTTT CCCGACGGTC GGCCTGTTGC GCGGTCATAC CCAGCAGACG
CCAACGGTGC TCGATCTGCA GGCTTTCGGC ATGCAACTGC ACTGGCTGGG TTATGCCGGC
TATCGTGAGC GGCATGCTGC GGGCTTCTGG TCGCCGTGGC AGGCCCGCTA TCCCGGTCTT
TATCCGATTG CCGAAGGCGG TGGCGGGCTT GCCGGTGCAT TGGGTTGCGG TCGGTTGCGG
GCAATGCTCG ACGCGCAGCT CGGGCACCTG GGCTGGGACG ATTACCACGG ATGGTGGTTG
GCGGCAGGCA CCGGCACCAC GCTGGCCGGC TTGCTGTTGG CAGAGGCGGG CGCCCGGCCG
GTGTATGGGG CGATGGCTGT GCCCGAGGAT CACGGGGTCG CGCAAAACAT CATCGCGGTG
CTGAATGAGG CGGCCGGTGC GCAAACCGAT GTCGCGCCGC GCCTGCCACC CACTTGTATT
CTGCTCGATG CCAGCCGCGG CGGTTTCGCC AGAACCGACG CGGCGCTGCT CGGTTTCATT
GCCGACAGCG AGGCACAGAG CGGTGTACCT CTGGAGCCGC TGTACACCGG CAAGGCGTTG
CTGGCCCTGC ATGATGAAGT GCTGGCCGGT CGTTTCGCGC CCGGCACCCG GCTGGTCTTC
GTCCACACCG GCGGCCTTCA GGGGCGGCGT GCGATGGGCC TGTAA
 
Protein sequence
MMLDALGWQP TAPLERLNLP WLQDTGVEVA ILRLDLIDAL ISGNKWFKLS EHLSLAVDSG 
AEGLISLGGA HSNHLHALAA AGKRFGFPTV GLLRGHTQQT PTVLDLQAFG MQLHWLGYAG
YRERHAAGFW SPWQARYPGL YPIAEGGGGL AGALGCGRLR AMLDAQLGHL GWDDYHGWWL
AAGTGTTLAG LLLAEAGARP VYGAMAVPED HGVAQNIIAV LNEAAGAQTD VAPRLPPTCI
LLDASRGGFA RTDAALLGFI ADSEAQSGVP LEPLYTGKAL LALHDEVLAG RFAPGTRLVF
VHTGGLQGRR AMGL