Gene Psyr_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1667 
Symbol 
ID3367169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1871855 
End bp1872442 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content57% 
IMG OID637652010 
Productcolicin V production protein 
Protein accessionYP_234753 
Protein GI66044912 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCATTTA CTCCGGTTGA CTGGGCAATT CTCGGAATTG TCGCCATCTC CGCCCTGATC 
AGTCTGAAGC GCGGCTTCGT AAAAGAAGCA CTGTCGTTGA CGACGTGGAT CATTGCAGGT
GTTGTGGCCT GGATGTTTGG CGCAGGGCTG TCGCAGTATC TGGTCAATTA CATAGAAACA
CCTTCGGCCC GCGTGATCGC GAGCTGTACC ATTCTTTTTG TCGCCACCCT GCTGGTAGGC
GCCATGGTCA ATTTTCTGAT AGGCGAGCTG ATTCGCGTCA CCGGGCTTTC CGGGACCGAT
CGTTTTCTCG GCATGGTCTT CGGCGCAGCG CGCGGAGGCC TGCTTGTCGT TGTGGCGGTA
GGGCTGTTGA GCCTGGGGCC GGTGCAACAG GATCAATGGT GGCAGCAGTC CAGGCTGGTG
CCGCAATTTC TCATGGTCGC TGACTGGTCG AAAAACCTGA TTCTCGGGAT GTCCAGCAAG
TGGCTCGCCA GCGGCATCAG CGTACCCGCT GACATGCCGT TCAAGGAACA GATCCTGCCG
TCTACAATGC CGCAGGATGT GCTCGGTAAA TCCAGTTCCA CTAAGTAG
 
Protein sequence
MPFTPVDWAI LGIVAISALI SLKRGFVKEA LSLTTWIIAG VVAWMFGAGL SQYLVNYIET 
PSARVIASCT ILFVATLLVG AMVNFLIGEL IRVTGLSGTD RFLGMVFGAA RGGLLVVVAV
GLLSLGPVQQ DQWWQQSRLV PQFLMVADWS KNLILGMSSK WLASGISVPA DMPFKEQILP
STMPQDVLGK SSSTK