Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1667 |
Symbol | |
ID | 3367169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1871855 |
End bp | 1872442 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637652010 |
Product | colicin V production protein |
Protein accession | YP_234753 |
Protein GI | 66044912 |
COG category | [R] General function prediction only |
COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCATTTA CTCCGGTTGA CTGGGCAATT CTCGGAATTG TCGCCATCTC CGCCCTGATC AGTCTGAAGC GCGGCTTCGT AAAAGAAGCA CTGTCGTTGA CGACGTGGAT CATTGCAGGT GTTGTGGCCT GGATGTTTGG CGCAGGGCTG TCGCAGTATC TGGTCAATTA CATAGAAACA CCTTCGGCCC GCGTGATCGC GAGCTGTACC ATTCTTTTTG TCGCCACCCT GCTGGTAGGC GCCATGGTCA ATTTTCTGAT AGGCGAGCTG ATTCGCGTCA CCGGGCTTTC CGGGACCGAT CGTTTTCTCG GCATGGTCTT CGGCGCAGCG CGCGGAGGCC TGCTTGTCGT TGTGGCGGTA GGGCTGTTGA GCCTGGGGCC GGTGCAACAG GATCAATGGT GGCAGCAGTC CAGGCTGGTG CCGCAATTTC TCATGGTCGC TGACTGGTCG AAAAACCTGA TTCTCGGGAT GTCCAGCAAG TGGCTCGCCA GCGGCATCAG CGTACCCGCT GACATGCCGT TCAAGGAACA GATCCTGCCG TCTACAATGC CGCAGGATGT GCTCGGTAAA TCCAGTTCCA CTAAGTAG
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Protein sequence | MPFTPVDWAI LGIVAISALI SLKRGFVKEA LSLTTWIIAG VVAWMFGAGL SQYLVNYIET PSARVIASCT ILFVATLLVG AMVNFLIGEL IRVTGLSGTD RFLGMVFGAA RGGLLVVVAV GLLSLGPVQQ DQWWQQSRLV PQFLMVADWS KNLILGMSSK WLASGISVPA DMPFKEQILP STMPQDVLGK SSSTK
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