| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1635 |
|---|
| Symbol | lpxK |
|---|
| ID | 3367137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1839118 |
|---|
| End bp | 1840113 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637651978 |
|---|
| Product | tetraacyldisaccharide 4'-kinase |
|---|
| Protein accession | YP_234721 |
|---|
| Protein GI | 66044880 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
|---|
| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0159123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTCA CTGACCGTTT GCTCGACGCC TGGTACAAGG GCCACCCTGC GCTGGCGCTG
TTGCGCCCGC TCGAAGGTCT TTACCGGCGT GTCGTAGAAC GCAAACGGGC GCGGTTTCTG
GCGGGCGAAG GTGATATCTA TCGCGCGCCG GTGCCGGTCA TTGTCGTGGG TAATATCACC
GTCGGTGGCA CGGGCAAGAC GCCGTTGATT CTCTGGATGA TCGAGCATTG CCGCCGTCGC
GGTTTGCGTG TCGGTGTGGT CAGCCGTGGT TACGGCGCCA AACCGCCAAG CCTGCCGTGG
CGCGTCCTGC CTGACCAGAG CGCCAGCGAG GCGGGGGACG AGCCGTTGCT CATCGTGCAG
CGCTGCGGCG TGCCGCTGAT GATCGATCCG GATCGCAGTC GCGCCGTACA GGCCTTGCTC
GCTGCTGAAC CGCTGGATCT GATTCTTTCC GACGACGGCT TGCAGCATTA CCGGCTGGCC
CGCGACCTGG AACTGGTGCT GATCGATGCC GCCCGTGGTC TGGGCAATCG CCGTTGTCTG
CCGGCCGGGC CATTGCGCGA ACCGGTCGAG CGGCTGAGCA GTGTCGACGC CTTGCTTTAT
AACGGTGCCA TGGCTGACAG GGGCGACGGC TACGCCTTCA GGCTCAAGCC TTCGGCACTG
ATCAATCTGC GCAGTGGCGA ACGTCAGCCG GTGGATTATT TTCCGGCCGG GCAGGCGCTG
CATGCGGTCG CCGGAATCGG CAATCCCCGA CGTTTCTTCA ATACCCTCGA AGGATTACAC
TGGCGACCGG TGCCTCACGC GTTCGCCGAC CATGCTGTCT ACAGTGCCGA AGCATTGACA
TTTACACCCG CGCTGCCTTT GGTCATGACC GAAAAGGATG CGGTCAAATG TCGTGCCTTT
GCCGCTGATG ACTGGTGGTA TCTGGCAGTG GATGCAGTAC CTTCCGATGC CTTTGTCGGT
TGGTTCGACC AGCAACTGCT ACGTCTTTCT CCATGA
|
|---|
| Protein sequence | MAFTDRLLDA WYKGHPALAL LRPLEGLYRR VVERKRARFL AGEGDIYRAP VPVIVVGNIT
VGGTGKTPLI LWMIEHCRRR GLRVGVVSRG YGAKPPSLPW RVLPDQSASE AGDEPLLIVQ
RCGVPLMIDP DRSRAVQALL AAEPLDLILS DDGLQHYRLA RDLELVLIDA ARGLGNRRCL
PAGPLREPVE RLSSVDALLY NGAMADRGDG YAFRLKPSAL INLRSGERQP VDYFPAGQAL
HAVAGIGNPR RFFNTLEGLH WRPVPHAFAD HAVYSAEALT FTPALPLVMT EKDAVKCRAF
AADDWWYLAV DAVPSDAFVG WFDQQLLRLS P
|
|---|
| |