Gene Psyr_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1607 
Symbol 
ID3367109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1806453 
End bp1807214 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content59% 
IMG OID637651950 
Producttranscriptional regulator GntR 
Protein accessionYP_234693 
Protein GI66044852 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.281055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGTA ACAGGGCTGG TCTAGTCCAG ACGGATACCG GAATGCGCGA AGATGTACCA 
CGGGCGGTAA CAACGATTTG CCATGCGCTG CAGGAGCAGA TCGAACACGG CTTGTTGCCG
CATGGCAGCA AGTTGCCTGC AGAGCGCAAG CTCAGTGAGG TATTCGCCAC CACGCGCATC
ACCTTGCGTG AAGCGCTTTT GCAACTCGAG TCGCAGGGGC TGATTTACCG CGAAGAGCGG
CGTGGCTGGT TCATCTCGCC GCCGCGGCTG GCCTATGACC TGATCAGGCG CAGCCATTTC
CACGCAATGG TCTGTGCCCA GGGAAGGGTG CCTCACACCC AGCTTCTTTC TGCACGCCTG
CAACCTGCTT CAGCGATGAT CTGTGAAATG CTGGAACTGC CGGCGCTGTC GAGCGTGATC
CAGATCTGTC GCGCGCGGCG CATCGATCAG CGCCTGGTGC TGTATGTCGA GCACTACCTG
AGGCCGGAGT TGTTCCCCGG CATTCTCGAA CACGATCTGA ACGAATCGCT GACCGCACTC
TACGCCCGCT GCTACGACAT TCACTGCGGC CGGGTGCGCT TCGACATGGT TCCCACGTCT
TTGCACAGCG AAGCATCCGC AGCACTGAAG GTTTCACTGG GTAGTCCGGG CCTGCGCATT
GCACGAGTCA ATTACGACCG CAAAGACCGG TTGATCGATT GCGATCTCGA ATACTGGCGT
CATGATGCTA TTCATGTGCG CGCTGAGGTG CATGGCGACT GA
 
Protein sequence
MPRNRAGLVQ TDTGMREDVP RAVTTICHAL QEQIEHGLLP HGSKLPAERK LSEVFATTRI 
TLREALLQLE SQGLIYREER RGWFISPPRL AYDLIRRSHF HAMVCAQGRV PHTQLLSARL
QPASAMICEM LELPALSSVI QICRARRIDQ RLVLYVEHYL RPELFPGILE HDLNESLTAL
YARCYDIHCG RVRFDMVPTS LHSEASAALK VSLGSPGLRI ARVNYDRKDR LIDCDLEYWR
HDAIHVRAEV HGD