Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1607 |
Symbol | |
ID | 3367109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1806453 |
End bp | 1807214 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637651950 |
Product | transcriptional regulator GntR |
Protein accession | YP_234693 |
Protein GI | 66044852 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.281055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGTA ACAGGGCTGG TCTAGTCCAG ACGGATACCG GAATGCGCGA AGATGTACCA CGGGCGGTAA CAACGATTTG CCATGCGCTG CAGGAGCAGA TCGAACACGG CTTGTTGCCG CATGGCAGCA AGTTGCCTGC AGAGCGCAAG CTCAGTGAGG TATTCGCCAC CACGCGCATC ACCTTGCGTG AAGCGCTTTT GCAACTCGAG TCGCAGGGGC TGATTTACCG CGAAGAGCGG CGTGGCTGGT TCATCTCGCC GCCGCGGCTG GCCTATGACC TGATCAGGCG CAGCCATTTC CACGCAATGG TCTGTGCCCA GGGAAGGGTG CCTCACACCC AGCTTCTTTC TGCACGCCTG CAACCTGCTT CAGCGATGAT CTGTGAAATG CTGGAACTGC CGGCGCTGTC GAGCGTGATC CAGATCTGTC GCGCGCGGCG CATCGATCAG CGCCTGGTGC TGTATGTCGA GCACTACCTG AGGCCGGAGT TGTTCCCCGG CATTCTCGAA CACGATCTGA ACGAATCGCT GACCGCACTC TACGCCCGCT GCTACGACAT TCACTGCGGC CGGGTGCGCT TCGACATGGT TCCCACGTCT TTGCACAGCG AAGCATCCGC AGCACTGAAG GTTTCACTGG GTAGTCCGGG CCTGCGCATT GCACGAGTCA ATTACGACCG CAAAGACCGG TTGATCGATT GCGATCTCGA ATACTGGCGT CATGATGCTA TTCATGTGCG CGCTGAGGTG CATGGCGACT GA
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Protein sequence | MPRNRAGLVQ TDTGMREDVP RAVTTICHAL QEQIEHGLLP HGSKLPAERK LSEVFATTRI TLREALLQLE SQGLIYREER RGWFISPPRL AYDLIRRSHF HAMVCAQGRV PHTQLLSARL QPASAMICEM LELPALSSVI QICRARRIDQ RLVLYVEHYL RPELFPGILE HDLNESLTAL YARCYDIHCG RVRFDMVPTS LHSEASAALK VSLGSPGLRI ARVNYDRKDR LIDCDLEYWR HDAIHVRAEV HGD
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