Gene Psyr_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1551 
Symbol 
ID3367050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1744147 
End bp1744857 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content58% 
IMG OID637651892 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_234638 
Protein GI66044797 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.390747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0285582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAC GTGAAGAACT CTACCGCGGC AAAGCCAAAT CGGTTTACAA GACCGACGAC 
GCTGACCGCT TGATCCTGCT GTTCCGCAAC GACACCTCGG CGTTCGACGG CAAGCGCATC
GAACAGCTCG ACCGTAAAGG CATGGTGAAC AACAAGTTCA ACGCCTTCAT CATGCAAAAG
CTCGAAGAAG CGGGTATTCC GACCCAGTTC GACAAGCTGC TGGGCGACAA CGAGTGCCTG
GTCAAGAAGC TCGACATGAT CCCGGTCGAA TGCGTTGTGC GTAACTACGC GGCTGGCAGC
CTGGTCAAGC GTCTGGGTAT CGAAGAGGGC ACCAGGCTCA ATCCGTACAC CTTCGAACTG
TTCCTCAAGG ACGACGCCAA GGGCGACCCG TTCATCAACG AATCCCACGT TGTGGCGTTC
GGCTGGGGCA CCGCCGAGCA ACTGGCTCGC ATGAAAGAGC TGTCGATCAA GGTCAATGAC
GTGCTGACCA AACTGTTCGA CGACGCCGGC CTGCTGCTGG TCGACTTCAA ACTCGAATTC
GGCGTATTCC ACGGTGAAAT CGTCCTCGGC GACGAATTCA GCCCGGACGG CTGCCGCCTC
TGGGACAAGG ACACCCGCAA GAAAATGGAC AAGGACCGCT TCCGCCAGGG TCTGGGCGAC
GTCATCGAAG CCTACGAAGA AGTCGCAAAC CGTCTGGGCG TGCCGCTGTA A
 
Protein sequence
MEKREELYRG KAKSVYKTDD ADRLILLFRN DTSAFDGKRI EQLDRKGMVN NKFNAFIMQK 
LEEAGIPTQF DKLLGDNECL VKKLDMIPVE CVVRNYAAGS LVKRLGIEEG TRLNPYTFEL
FLKDDAKGDP FINESHVVAF GWGTAEQLAR MKELSIKVND VLTKLFDDAG LLLVDFKLEF
GVFHGEIVLG DEFSPDGCRL WDKDTRKKMD KDRFRQGLGD VIEAYEEVAN RLGVPL