| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1450 |
|---|
| Symbol | |
|---|
| ID | 3366949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1637907 |
|---|
| End bp | 1638269 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637651792 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234538 |
|---|
| Protein GI | 66044697 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01690] integrative conjugative element protein, RAQPRD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.176876 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATCA ATCTCCCCGC GATCAGATCG ACGTCTTCAC GCGTGCAGAT CTGCTTGACC
GCAGTCCTCC TATGCACACC GTTGCTCTCC ACATATGCCC AGGCAGCCGG CACGGCTTCT
GAACAAGCCA ATGTTGAGGT GATGATTCGC CAGCTCAACG CGCTTGAGGC GGTTGCTCAA
CGCAGCGCTG ATCTTCCAAA CGAATCGGCT CAGCGCTATC ACCTGGATTA TCCCAGGTTA
GTGAGCGACA TCTCCCGCAT TCGCCAAGGC TTGCAGGACT ATCTGACTCC CTCCCGGGCT
CAGCCCCGCG ACCCCGTCGA GATCTCAGGC CATTACAACG TCAGCGGTGA TCACACGCCA
TGA
|
|---|
| Protein sequence | MKINLPAIRS TSSRVQICLT AVLLCTPLLS TYAQAAGTAS EQANVEVMIR QLNALEAVAQ
RSADLPNESA QRYHLDYPRL VSDISRIRQG LQDYLTPSRA QPRDPVEISG HYNVSGDHTP
|
|---|
| |