Gene Psyr_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1426 
Symbol 
ID3366925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1614863 
End bp1616401 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content54% 
IMG OID637651769 
Producthypothetical protein 
Protein accessionYP_234515 
Protein GI66044674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.191891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTGC ACACGAATGA CTACCTTGAG TATTACCTGA CGTTGGTCGG ATGGCTCATA 
AACGGCGGCA TCTGGAACAT GATCGAGGAC AGCGGACTCT TCGCAGCGCC CTTTGCCGCC
ATTGTCATCA GCGAATGGCT CAGAGCCCGC GGTGAGGGAG CTGATGAGGG CAACAAGGGC
GTCCTCTCGT TGGCCCGAGT AGAAAACCGG TTCTACACGG CAATCCTAGT CATCATCCTG
GCTTGCATGC CTCTGGTAAA CGTCAGCATT GATACCATCC AGTTCGACCG AAGCCGCTCA
GAGCAATGCC AATACTCAAT ACCCAATCCG ACTGATACAG GCTGGGAAAC ATCCTTCAGT
ACGCTGAACG GTAAAAGCGC CACAGTGCCC GTCTGGTGGC TGTTTGTGCA TGCGATGTCC
AAGGCAGCAA CTGCGGCCTC AGTCGCAGCT ATTCCCTGTG GAGTGGATTT GCAACAGGTC
CGGATGGACG TCAACAAGGC CCGCATCAAC GATCCGCTGC TTGCCCAGGA GGTCGCTGAC
TTCACGAACG ATTGCTACGC ACGTGCGCGC GCAAAGCTGT TCATGACCCA GCCTACCCTC
AGCAATGATC AACTCAACGA CGTCAACTGG ATCGGTTCAC ACTTCTTCCT GCAAACATCC
GGCTATTACA GCGATGGTTT CTCTGGGTTC AGGTCACACA CTCCCCGAAC CAAATGGCCC
TATGACGCAA CCCGGGACGC GGGCCTGCCA CAAACCACTG GTGGTGGTGG GTTTCCTACA
TGCACTCAAT GGTGGTCGGA TGGAAGCGTC GGGCTCAGAG CCAGGCTGCT GGAACAGGTC
AGTCCAGATC TGCTGAGCAA GCTTGCTCAG TGGGCAAAAT TCATGACCCA GACCGAAGTG
AGCGACTCGG TCATTCGCGA TCTGGTCTCT CCTAGGAAGC AGCAACTGAC CCAGGGTCAG
GTTTATTCAG ACTATGGCGG TCAAGTCGGT GGCTCTGTGC TAAATGACTT TACACGCATT
GCAGCTACAG CTGGTCAGGC GGCAGGATCT CTTGTGATGT ATCCAGCCAT GGACAGTGTA
AGGCAAGCAG CGCCCATGGT GATGGCCTTC CTAAAGATGG CTCTCATCAT TTGCATTCCG
TTTGTACTGG TGATCGGGAT GTTTGATCTG AAGGTCGTGA TGACGATTAC TTTTGCTGCG
TTCGCTTTGA TCTTTGTCGA CTTCTGGTTC CAGTTGGCCC GCTGGGTAGA TAGCACGATT
CTCGATGCCC TTTATGGTAA CGGGATCGGC AGCAATGTCC CCCACTCCAA TTTCGACCCA
GTGTTCGGGG CCAGCAATGC CCAAGGAGAC TTACTGCTGG ACTTTGTGAT GGGCGCAATG
TTTATAGCGC TTCCGGGATT TTGGGTAGTG GCGCTGGGCT GGAGTGGGAT GCAACTTGGT
TCACTCATGA CAGGGCTTAC CATCGGCACC AACGGGGCTA AAGATGCAGG AGGTAAAGGC
GCTGATGTAG CAATGGGAAT CGCGAAGGGG AGGATTTAA
 
Protein sequence
MILHTNDYLE YYLTLVGWLI NGGIWNMIED SGLFAAPFAA IVISEWLRAR GEGADEGNKG 
VLSLARVENR FYTAILVIIL ACMPLVNVSI DTIQFDRSRS EQCQYSIPNP TDTGWETSFS
TLNGKSATVP VWWLFVHAMS KAATAASVAA IPCGVDLQQV RMDVNKARIN DPLLAQEVAD
FTNDCYARAR AKLFMTQPTL SNDQLNDVNW IGSHFFLQTS GYYSDGFSGF RSHTPRTKWP
YDATRDAGLP QTTGGGGFPT CTQWWSDGSV GLRARLLEQV SPDLLSKLAQ WAKFMTQTEV
SDSVIRDLVS PRKQQLTQGQ VYSDYGGQVG GSVLNDFTRI AATAGQAAGS LVMYPAMDSV
RQAAPMVMAF LKMALIICIP FVLVIGMFDL KVVMTITFAA FALIFVDFWF QLARWVDSTI
LDALYGNGIG SNVPHSNFDP VFGASNAQGD LLLDFVMGAM FIALPGFWVV ALGWSGMQLG
SLMTGLTIGT NGAKDAGGKG ADVAMGIAKG RI