Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1426 |
Symbol | |
ID | 3366925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1614863 |
End bp | 1616401 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637651769 |
Product | hypothetical protein |
Protein accession | YP_234515 |
Protein GI | 66044674 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.191891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCTTGC ACACGAATGA CTACCTTGAG TATTACCTGA CGTTGGTCGG ATGGCTCATA AACGGCGGCA TCTGGAACAT GATCGAGGAC AGCGGACTCT TCGCAGCGCC CTTTGCCGCC ATTGTCATCA GCGAATGGCT CAGAGCCCGC GGTGAGGGAG CTGATGAGGG CAACAAGGGC GTCCTCTCGT TGGCCCGAGT AGAAAACCGG TTCTACACGG CAATCCTAGT CATCATCCTG GCTTGCATGC CTCTGGTAAA CGTCAGCATT GATACCATCC AGTTCGACCG AAGCCGCTCA GAGCAATGCC AATACTCAAT ACCCAATCCG ACTGATACAG GCTGGGAAAC ATCCTTCAGT ACGCTGAACG GTAAAAGCGC CACAGTGCCC GTCTGGTGGC TGTTTGTGCA TGCGATGTCC AAGGCAGCAA CTGCGGCCTC AGTCGCAGCT ATTCCCTGTG GAGTGGATTT GCAACAGGTC CGGATGGACG TCAACAAGGC CCGCATCAAC GATCCGCTGC TTGCCCAGGA GGTCGCTGAC TTCACGAACG ATTGCTACGC ACGTGCGCGC GCAAAGCTGT TCATGACCCA GCCTACCCTC AGCAATGATC AACTCAACGA CGTCAACTGG ATCGGTTCAC ACTTCTTCCT GCAAACATCC GGCTATTACA GCGATGGTTT CTCTGGGTTC AGGTCACACA CTCCCCGAAC CAAATGGCCC TATGACGCAA CCCGGGACGC GGGCCTGCCA CAAACCACTG GTGGTGGTGG GTTTCCTACA TGCACTCAAT GGTGGTCGGA TGGAAGCGTC GGGCTCAGAG CCAGGCTGCT GGAACAGGTC AGTCCAGATC TGCTGAGCAA GCTTGCTCAG TGGGCAAAAT TCATGACCCA GACCGAAGTG AGCGACTCGG TCATTCGCGA TCTGGTCTCT CCTAGGAAGC AGCAACTGAC CCAGGGTCAG GTTTATTCAG ACTATGGCGG TCAAGTCGGT GGCTCTGTGC TAAATGACTT TACACGCATT GCAGCTACAG CTGGTCAGGC GGCAGGATCT CTTGTGATGT ATCCAGCCAT GGACAGTGTA AGGCAAGCAG CGCCCATGGT GATGGCCTTC CTAAAGATGG CTCTCATCAT TTGCATTCCG TTTGTACTGG TGATCGGGAT GTTTGATCTG AAGGTCGTGA TGACGATTAC TTTTGCTGCG TTCGCTTTGA TCTTTGTCGA CTTCTGGTTC CAGTTGGCCC GCTGGGTAGA TAGCACGATT CTCGATGCCC TTTATGGTAA CGGGATCGGC AGCAATGTCC CCCACTCCAA TTTCGACCCA GTGTTCGGGG CCAGCAATGC CCAAGGAGAC TTACTGCTGG ACTTTGTGAT GGGCGCAATG TTTATAGCGC TTCCGGGATT TTGGGTAGTG GCGCTGGGCT GGAGTGGGAT GCAACTTGGT TCACTCATGA CAGGGCTTAC CATCGGCACC AACGGGGCTA AAGATGCAGG AGGTAAAGGC GCTGATGTAG CAATGGGAAT CGCGAAGGGG AGGATTTAA
|
Protein sequence | MILHTNDYLE YYLTLVGWLI NGGIWNMIED SGLFAAPFAA IVISEWLRAR GEGADEGNKG VLSLARVENR FYTAILVIIL ACMPLVNVSI DTIQFDRSRS EQCQYSIPNP TDTGWETSFS TLNGKSATVP VWWLFVHAMS KAATAASVAA IPCGVDLQQV RMDVNKARIN DPLLAQEVAD FTNDCYARAR AKLFMTQPTL SNDQLNDVNW IGSHFFLQTS GYYSDGFSGF RSHTPRTKWP YDATRDAGLP QTTGGGGFPT CTQWWSDGSV GLRARLLEQV SPDLLSKLAQ WAKFMTQTEV SDSVIRDLVS PRKQQLTQGQ VYSDYGGQVG GSVLNDFTRI AATAGQAAGS LVMYPAMDSV RQAAPMVMAF LKMALIICIP FVLVIGMFDL KVVMTITFAA FALIFVDFWF QLARWVDSTI LDALYGNGIG SNVPHSNFDP VFGASNAQGD LLLDFVMGAM FIALPGFWVV ALGWSGMQLG SLMTGLTIGT NGAKDAGGKG ADVAMGIAKG RI
|
| |