| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1374 |
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| Symbol | |
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| ID | 3366869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1556701 |
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| End bp | 1557708 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637651713 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_234463 |
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| Protein GI | 66044622 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.247864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTTG GCAACGAAGC GCCGGAGTTT GACATCGATG ATGAAGTGCT CCTTATGGAA
GCCGGCATTG TCCTGAAGGA AGCGTCAAAC GAGAAGCAGC CAGCCGCTGT CTCGGGACGT
ACCAAGGTCA AGCATTCAAC ATCGCTCAAA CAACACAAGT ACATTGACTA CACGCGGGCG
CTCGATGCTA CCCAGCTGTA CCTCAATGAG ATCGGTTTTT CTCCTCTATT GTCCCCGGAA
GAAGAAGTTC ATTTTGCGCG TCTGTCGCAA AGTGGAGATC CGGCCGGGCG CAAACGCATG
ATTGAAAGCA ATCTGCGGCT GGTAGTGAAA ATTGCCAGAC GCTATGTCAA TCGTGGGCTT
TCATTGCTTG ATCTGATCGA GGAGGGCAAC CTGGGGTTGA TCCGGGCGGT TGAGAAGTTC
GACCCAGAGC GCGGCTTTCG TTTTTCGACC TACGCCACCT GGTGGATTCG TCAGACCATT
GAACGCGCGA TCATGAATCA GACGCGGACC ATCCGGCTGC CGATTCATGT GGTCAAGGAG
CTGAACGTTT ATCTGCGTGC GGCCAGAGAG CTGACCCAGA AGCTGGATCA CGAGCCCTCT
CCTGAAGAGA TCGCCAACCT GCTGGAAAAA CCGGTAGGCG AGGTCAAGCG CATGCTGGGC
CTGAACGAGC GTGTTTCGTC GGTGGACGTT TCGCTGGGGC CGGATTCGGA CAAGACACTG
CTCGATACCT TGACCGACGA CCGTCCGACA GACCCCTGCG AGCTGCTGCA GGACGACGAT
CTTTCACAGA GCATCGATCA ATGGCTGTCT GAACTGACCG AGAAGCAGCG CGAGGTTGTG
ATTCGTCGCT TTGGCTTGCG CGGGCATGAA AGCAGCACAC TTGAAGATGT TGGGCTTGAG
ATTGGTCTGA CGCGTGAGCG TGTAAGGCAG ATTCAGGTCG AAGGACTCAA GCGTCTGCGC
GAGATCCTTG AGAAAAACGG TCTGTCCAGC GAGTCGCTCT TCCAGTAA
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| Protein sequence | MALGNEAPEF DIDDEVLLME AGIVLKEASN EKQPAAVSGR TKVKHSTSLK QHKYIDYTRA
LDATQLYLNE IGFSPLLSPE EEVHFARLSQ SGDPAGRKRM IESNLRLVVK IARRYVNRGL
SLLDLIEEGN LGLIRAVEKF DPERGFRFST YATWWIRQTI ERAIMNQTRT IRLPIHVVKE
LNVYLRAARE LTQKLDHEPS PEEIANLLEK PVGEVKRMLG LNERVSSVDV SLGPDSDKTL
LDTLTDDRPT DPCELLQDDD LSQSIDQWLS ELTEKQREVV IRRFGLRGHE SSTLEDVGLE
IGLTRERVRQ IQVEGLKRLR EILEKNGLSS ESLFQ
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