Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1335 |
Symbol | |
ID | 3366830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1513884 |
End bp | 1515125 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651674 |
Product | aminotransferase, class V |
Protein accession | YP_234424 |
Protein GI | 66044583 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.11336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTGA ACCCGCCTCC ACACGCTGGA CGAACAATGC CCCTCTTCTC TCCCTGGCGT GGCGACTTCC CCGCCATCGC CGCCCTGCAA CGGCAAGGCC AGACTTATCT GGACAACGCC GCCACGACGC AAAAGCCCCA GGCGCTGATC GACGCCCTGA CTCATTACTA TGCCAACGGT GCCGCCAATG TGCATCGTGC CCAGCATCTG CCCGGCGCAC ACGCCACTCA AGCGTTCGAG GCCAGCCGTG GCAAGGCCGC CCGCTGGCTG AATGCCGGCG AGAACGGCCA GATCATCTTC ACTCACGGCG CGACGTCTGC GCTGAACCTG CTGGCCTACG GGCTGGAACA TGAATTCGCG GCGGGCGACG AAATCGCCAT CAGCGCGCTG GAACATCACG CCAATCTGCT GCCATGGCAG CAACTGGCTC AGCGTCGCGG CCTGAAACTG GTGGTTCTGC CGCTGGATAT CGATGGCGTG ATCGACTGCG ACGCGGCAGC CAACCTGATC GGACCGCGCA CACGTCTGCT CGCCGTCACC CAGCTCTCCA ACGTGCTCGG CACCTGGCAA CCGCTCGCTC GTCTTATCGC ACTGGCCAAG ACCCAAGGCG CCATTACCGT CGTGGACGGC TCACAGGGCG TGGTGCACGG ACGCCACGAT GTGCAGGCGC TGGGCTGCGA TTTTTATGTG TTTTCCAGCC ACAAACTGTA TGGCCCGGAA GGACTCGGCG TGCTTTACGG GTGCAACGAG GCGCTGCCCA GCCTCGCGCA CTGGCAGTTC GGCGGCGAGA TGGTGCTGAC AGCCGATTAT CAGCACGCGA AATTTCGTCC GGCACCCCTG GGTTTCGAGG CCGGCACCCC GCCCATCGCC AGTGTGATCG GTCTGGGCGC TACGCTGGCC TATCTGGACA GCCTCGATCA TCAGGCGGTC GCAGAACATG AAGCCAGACT GCACCGTCGC CTGCTTGAGG GCCTGCAACA GCGTAATGGC ATCCAGGTTC TGGGCTCGCC GGATCTGGCA CTGGTCAGCT TCGTCGTCGA CGATGTTCAC AATGCTGATG TGGCTCACCT GCTGACCGAA CAGGGCATTG CCGTACGTGC CGGTCATCAT TGCGCGATGC CGCTGTTCAA GACCCTTGGC CTGCCCGGCG CGATTCGCGT GTCACTGGCG CTGTACAACG ATTCGGACGA TCTGCTGCAG TTCTTCAGCG CACTGGATCA AGCACTGGAG CTGCTTCGAT GA
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Protein sequence | MALNPPPHAG RTMPLFSPWR GDFPAIAALQ RQGQTYLDNA ATTQKPQALI DALTHYYANG AANVHRAQHL PGAHATQAFE ASRGKAARWL NAGENGQIIF THGATSALNL LAYGLEHEFA AGDEIAISAL EHHANLLPWQ QLAQRRGLKL VVLPLDIDGV IDCDAAANLI GPRTRLLAVT QLSNVLGTWQ PLARLIALAK TQGAITVVDG SQGVVHGRHD VQALGCDFYV FSSHKLYGPE GLGVLYGCNE ALPSLAHWQF GGEMVLTADY QHAKFRPAPL GFEAGTPPIA SVIGLGATLA YLDSLDHQAV AEHEARLHRR LLEGLQQRNG IQVLGSPDLA LVSFVVDDVH NADVAHLLTE QGIAVRAGHH CAMPLFKTLG LPGAIRVSLA LYNDSDDLLQ FFSALDQALE LLR
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