| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1248 |
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| Symbol | ispG |
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| ID | 3366743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1403345 |
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| End bp | 1404454 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637651587 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_234337 |
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| Protein GI | 66044496 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.137146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGCG AATCTCCAAT CAAGCGTCGC GAATCCCGGA AAATATGGGT CGGTTCCGTA
CCGGTAGGCG GTGATGCGCC GATCGCGGTG CAGAGCATGA CCAACAGCGA TACCAACGAT
GTCGCCGCTA CCGTGGCACA GATCAATCGT CTGGAAGCGG CGGGTGTCGA CATCGTGCGT
GTTTCGGTGC CGGACATGGA CGCTGCCGAA GCATTCGGCC GCATCAAGCA ACTGGTCAAG
GTGCCGCTGG TCGCCGACAT TCACTTCGAT CACCGCATCG CCTTGCGTGT GGCGGAGCTG
GGCGTCGACT GTCTGCGTAT CAACCCGGGC AACATCGGTC GCGAAGACCG TGTGCGGGCG
GTGGTCGATG CTGCACGTGA TCGGGGCATC CCGATCCGTA TCGGCGTCAA TGCCGGTTCG
CTGGAAAAAG ACCTGCAGAA GAAGTACGGC GAGCCCACGC CAGAGGCCCT GGTAGAGTCT
GCGCTGCGCC ATGTCGAGCA TCTGCAACGC CTGAACTTTC AGGACTTCAA GGTCAGCGTC
AAGGCTTCCG ATGTGTTCAT GGCGGTCGCG GCCTATCGGC TGCTGGCCAA GGAGATTGTT
CAGCCGCTGC ACCTGGGCAT CACCGAAGCC GGTGGTCTGC GTTCGGGTAC GGTGAAATCG
GCTGTCGGTC TCGGTATGCT GCTTGCCGAA GGAATTGGCG ATACTATCCG CATCTCGCTG
GCGGCTGACC CGGTCGAGGA AGTGAAGGTC GGGTACGACA TTCTCAAATC GTTGCGCCTT
CGTTCGCGTG GAATCAACTT CATCGCCTGT CCGAGCTGCT CGCGGCAGAA CTTCGATGTG
GTCAAGACCA TGAACGAGCT GGAAGGTCGA CTCGAGGATT TGCTGGTGCC GCTCGATGTC
GCGGTGATCG GTTGTGTGGT CAATGGTCCG GGCGAAGCCA AAGAGGCGCA CATCGGCCTG
ACCGGTGGCA CGCCGAACCT GATCTACATC GACGGCAAAC CCGCGCAGAA ACTGACCAAT
GACAATCTCG TGAATGAGCT GGAACGCTTG ATTCGCGAGA AAGCGGCTGA AAAAGCCGAA
GCCGACGCCT CGGTCATCGT GCGCGGCTAA
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| Protein sequence | MHGESPIKRR ESRKIWVGSV PVGGDAPIAV QSMTNSDTND VAATVAQINR LEAAGVDIVR
VSVPDMDAAE AFGRIKQLVK VPLVADIHFD HRIALRVAEL GVDCLRINPG NIGREDRVRA
VVDAARDRGI PIRIGVNAGS LEKDLQKKYG EPTPEALVES ALRHVEHLQR LNFQDFKVSV
KASDVFMAVA AYRLLAKEIV QPLHLGITEA GGLRSGTVKS AVGLGMLLAE GIGDTIRISL
AADPVEEVKV GYDILKSLRL RSRGINFIAC PSCSRQNFDV VKTMNELEGR LEDLLVPLDV
AVIGCVVNGP GEAKEAHIGL TGGTPNLIYI DGKPAQKLTN DNLVNELERL IREKAAEKAE
ADASVIVRG
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