| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1207 |
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| Symbol | HrcS |
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| ID | 3366701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1366004 |
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| End bp | 1366270 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651548 |
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| Product | type III secretion protein HrcS |
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| Protein accession | YP_234299 |
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| Protein GI | 66044458 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4794] Type III secretory pathway, component EscS |
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| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.427882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGCGT TGGCGTTGTT CAAGCAAGGC ATGTTTCTGG TCGTCATCCT GACCGCCCCG
CCGCTGGCCG TTGCGGTGCT GGTGGGTGTG GTCACCTCGC TGCTGCAGGC ACTCATGCAG
ATTCAGGATC AGACATTGCC CTTCGGCATC AAACTGGGCG CCGTCGGACT GACCCTGGCC
ATGACCGGCC GCTGGATCGG CGTCGAGCTG ATCGAGTTCA TCAATATGGC CTTCGACCTG
ATTGCCCGCT CCGGGGTCAG TCACTAA
|
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| Protein sequence | MEALALFKQG MFLVVILTAP PLAVAVLVGV VTSLLQALMQ IQDQTLPFGI KLGAVGLTLA
MTGRWIGVEL IEFINMAFDL IARSGVSH
|
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