Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1171 |
Symbol | |
ID | 3366665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1325875 |
End bp | 1326255 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637651512 |
Product | hypothetical protein |
Protein accession | YP_234263 |
Protein GI | 66044422 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.768585 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCACGA CCGAGCCAGC CACCGTGACC TTCACCAGCG CCATCCCGAT CCTGCGGATG TTCGATGAAC GCAAAGCGCG TGAGTTCTAT ATCGACTTTC TCGGTTTCAG CATCGAATTC GAACACCGCT TCGAAGCGGA TCTGCCGTTG TATCTAGGCA TCAGCCGTAA CGGGCTGAAC CTGCACCTCT CCGAGCATCA CGGTGACGCC TGTCCAGGTG CGGCGGTGTT CATTCCGACG CAGAACATCG AGCAATTGCG CGATGAGCTG ATCGGCAAGC AGTACGGCTA TGCCCGCCCG GATATTGTTC AGCAAGGCTG GGGGAAGGTA CTGGAAGTCT GCGACCCGTT CGGTAACCGG CTCAGGTTCT GCGAGAGCTG A
|
Protein sequence | MPTTEPATVT FTSAIPILRM FDERKAREFY IDFLGFSIEF EHRFEADLPL YLGISRNGLN LHLSEHHGDA CPGAAVFIPT QNIEQLRDEL IGKQYGYARP DIVQQGWGKV LEVCDPFGNR LRFCES
|
| |