Gene Psyr_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1167 
Symbol 
ID3366661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1320687 
End bp1321607 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content67% 
IMG OID637651508 
Productinner-membrane translocator 
Protein accessionYP_234259 
Protein GI66044418 
COG category[R] General function prediction only 
COG ID[COG1079] Uncharacterized ABC-type transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.54838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATA TCGACCTGAC TACCTTTCTG CTCGCCCTGC TGGCCGGCGC CATCCGCGTC 
GGCACGCCTT TTCTGTTCGT CAGCCTGGGC GAATGCCTGA CCGAGAAGAG CGGCCGGATC
AACCTGGGGC TGGAGGGCAT TCTGGTCGCG GGTGCCATGT CCGGATATGC CGTCGCGTGC
CTGAGCGGCT CGGCGTGGCT GGGCGTCGGC GCGGCTGCCG GGGTCGGCAT TCTGCTGGGC
CTGCTGCATG GGCTGGCGTG CTCGTTGCCA CGGGTCAACG ACATCGCGTT CGGCATCGCA
CTGATCCTGC TCGGCACCGG CCTGGCGTTC TTTCTCGGCA AAGCCTTTAT CCAGCCACAG
GCGCCCATGC TGCCTTCACT GGCGCTGGGT GCCTGGAGCA GCGAAGAACG CGTGCGCTCG
GCGCTGAACA TCAATGTGCT GTTCTTCGTC GGTGCAGCGC TGGCGTTCGT GCTGCACTGG
GGGCTGCGCA CCACGCGCTG GGGGCTGATG CTGCGTCTGG TCGGCGACCA TGCCGAAACC
GCTCAGGCGC TGGGCTATCG ACCGCTCAAG GTACGCATCG TGGCCACTGC GGTGGGCGGC
GGGCTGGCCG GTATCGGCGG TGCCTATCTG TCGCTCTACT ACCCCGGCAG CTGGAACGAA
GGGCTGTCCA GCGGTCAGGG GCTGATGGCC GTGGCGCTGG TGATCTTTGC CCGCTGGCGC
CCGTTGGCGT GTCTGTGGGC GTCGTTGCTG TTCGGCGCTG CCGGTGCCAT CGGCCCGGCC
CTGCAAGCGG TCGGTATCAG CACCGGCTAT TACCTGTTTG CCGCAGCACC TTATGCGCTG
ACGCTGGTGG TGATGTACGC CACCTGTCGC CGTGGTCGCA CTTTGAACGG CGCGCCGGGC
GAACTCAGCC TGACGCGATG A
 
Protein sequence
MADIDLTTFL LALLAGAIRV GTPFLFVSLG ECLTEKSGRI NLGLEGILVA GAMSGYAVAC 
LSGSAWLGVG AAAGVGILLG LLHGLACSLP RVNDIAFGIA LILLGTGLAF FLGKAFIQPQ
APMLPSLALG AWSSEERVRS ALNINVLFFV GAALAFVLHW GLRTTRWGLM LRLVGDHAET
AQALGYRPLK VRIVATAVGG GLAGIGGAYL SLYYPGSWNE GLSSGQGLMA VALVIFARWR
PLACLWASLL FGAAGAIGPA LQAVGISTGY YLFAAAPYAL TLVVMYATCR RGRTLNGAPG
ELSLTR