Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1167 |
Symbol | |
ID | 3366661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1320687 |
End bp | 1321607 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637651508 |
Product | inner-membrane translocator |
Protein accession | YP_234259 |
Protein GI | 66044418 |
COG category | [R] General function prediction only |
COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.54838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATA TCGACCTGAC TACCTTTCTG CTCGCCCTGC TGGCCGGCGC CATCCGCGTC GGCACGCCTT TTCTGTTCGT CAGCCTGGGC GAATGCCTGA CCGAGAAGAG CGGCCGGATC AACCTGGGGC TGGAGGGCAT TCTGGTCGCG GGTGCCATGT CCGGATATGC CGTCGCGTGC CTGAGCGGCT CGGCGTGGCT GGGCGTCGGC GCGGCTGCCG GGGTCGGCAT TCTGCTGGGC CTGCTGCATG GGCTGGCGTG CTCGTTGCCA CGGGTCAACG ACATCGCGTT CGGCATCGCA CTGATCCTGC TCGGCACCGG CCTGGCGTTC TTTCTCGGCA AAGCCTTTAT CCAGCCACAG GCGCCCATGC TGCCTTCACT GGCGCTGGGT GCCTGGAGCA GCGAAGAACG CGTGCGCTCG GCGCTGAACA TCAATGTGCT GTTCTTCGTC GGTGCAGCGC TGGCGTTCGT GCTGCACTGG GGGCTGCGCA CCACGCGCTG GGGGCTGATG CTGCGTCTGG TCGGCGACCA TGCCGAAACC GCTCAGGCGC TGGGCTATCG ACCGCTCAAG GTACGCATCG TGGCCACTGC GGTGGGCGGC GGGCTGGCCG GTATCGGCGG TGCCTATCTG TCGCTCTACT ACCCCGGCAG CTGGAACGAA GGGCTGTCCA GCGGTCAGGG GCTGATGGCC GTGGCGCTGG TGATCTTTGC CCGCTGGCGC CCGTTGGCGT GTCTGTGGGC GTCGTTGCTG TTCGGCGCTG CCGGTGCCAT CGGCCCGGCC CTGCAAGCGG TCGGTATCAG CACCGGCTAT TACCTGTTTG CCGCAGCACC TTATGCGCTG ACGCTGGTGG TGATGTACGC CACCTGTCGC CGTGGTCGCA CTTTGAACGG CGCGCCGGGC GAACTCAGCC TGACGCGATG A
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Protein sequence | MADIDLTTFL LALLAGAIRV GTPFLFVSLG ECLTEKSGRI NLGLEGILVA GAMSGYAVAC LSGSAWLGVG AAAGVGILLG LLHGLACSLP RVNDIAFGIA LILLGTGLAF FLGKAFIQPQ APMLPSLALG AWSSEERVRS ALNINVLFFV GAALAFVLHW GLRTTRWGLM LRLVGDHAET AQALGYRPLK VRIVATAVGG GLAGIGGAYL SLYYPGSWNE GLSSGQGLMA VALVIFARWR PLACLWASLL FGAAGAIGPA LQAVGISTGY YLFAAAPYAL TLVVMYATCR RGRTLNGAPG ELSLTR
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